BLASTX nr result

ID: Cnidium21_contig00030928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030928
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96757.1| hAT family dimerisation domain, putative [Oryza s...   101   7e-20
ref|NP_001067616.1| Os11g0247800 [Oryza sativa Japonica Group] g...   101   7e-20
gb|EEE51924.1| hypothetical protein OsJ_33534 [Oryza sativa Japo...   101   7e-20
ref|XP_002446356.1| hypothetical protein SORBIDRAFT_06g014674 [S...    99   4e-19
ref|XP_003553096.1| PREDICTED: zinc finger MYM-type protein 1-li...    95   5e-18

>gb|AAX96757.1| hAT family dimerisation domain, putative [Oryza sativa Japonica
           Group] gi|77549563|gb|ABA92360.1| hAT family
           dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 1071

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = -2

Query: 331 WLEYSVSEDAAFCFYCYLFGDIKKRD---QAFTKKGFRNWKKALDKFRSHIGAESSIHNN 161
           WLEYS+++DAAFCFYCYLF   +  +    AFT KGF NWK A   F  H+G   S HN 
Sbjct: 160 WLEYSIAKDAAFCFYCYLFKQPRPDNFGVDAFTSKGFTNWKHATGSFNEHVGKVDSFHNR 219

Query: 160 ARTLYLGFKDQRQSVTRRFSSGNEVIGAAYRARLTASVDVARLLL 26
           AR     FK+QRQSV+ +  SG++ +   Y  R+T  + V R LL
Sbjct: 220 ARKHCEDFKNQRQSVSYKMDSGSKKLEQQYYGRITMILGVVRFLL 264


>ref|NP_001067616.1| Os11g0247800 [Oryza sativa Japonica Group]
           gi|62734649|gb|AAX96758.1| hAT family dimerisation
           domain, putative [Oryza sativa Japonica Group]
           gi|77549562|gb|ABA92359.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|113644838|dbj|BAF27979.1| Os11g0247800 [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = -2

Query: 331 WLEYSVSEDAAFCFYCYLFGDIKKRD---QAFTKKGFRNWKKALDKFRSHIGAESSIHNN 161
           WLEYS+++DAAFCFYCYLF   +  +    AFT KGF NWK A   F  H+G   S HN 
Sbjct: 336 WLEYSIAKDAAFCFYCYLFKQPRPDNFGVDAFTSKGFTNWKHATGSFNEHVGKVDSFHNR 395

Query: 160 ARTLYLGFKDQRQSVTRRFSSGNEVIGAAYRARLTASVDVARLLL 26
           AR     FK+QRQSV+ +  SG++ +   Y  R+T  + V R LL
Sbjct: 396 ARKHCEDFKNQRQSVSYKMDSGSKKLEQQYYGRITMILGVVRFLL 440


>gb|EEE51924.1| hypothetical protein OsJ_33534 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = -2

Query: 331 WLEYSVSEDAAFCFYCYLFGDIKKRD---QAFTKKGFRNWKKALDKFRSHIGAESSIHNN 161
           WLEYS+++DAAFCFYCYLF   +  +    AFT KGF NWK A   F  H+G   S HN 
Sbjct: 288 WLEYSIAKDAAFCFYCYLFKQPRPDNFGVDAFTSKGFTNWKHATGSFNEHVGKVDSFHNR 347

Query: 160 ARTLYLGFKDQRQSVTRRFSSGNEVIGAAYRARLTASVDVARLLL 26
           AR     FK+QRQSV+ +  SG++ +   Y  R+T  + V R LL
Sbjct: 348 ARKHCEDFKNQRQSVSYKMDSGSKKLEQQYYGRITMILGVVRFLL 392


>ref|XP_002446356.1| hypothetical protein SORBIDRAFT_06g014674 [Sorghum bicolor]
           gi|241937539|gb|EES10684.1| hypothetical protein
           SORBIDRAFT_06g014674 [Sorghum bicolor]
          Length = 305

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
 Frame = -2

Query: 334 EWLEYSVSEDAAFCFYCYLFGDIKK---RDQAFTKKGFRNWKKALDKFRSHIGAESSIHN 164
           +WLEYSV++D A+CFYCYLF   +     +  F + GFRNWK A D FR H  +    H+
Sbjct: 97  DWLEYSVAKDVAYCFYCYLFEPQQNWFNSNDTFNRVGFRNWKNANDSFREHAQSIDGFHS 156

Query: 163 NARTLYLGFKDQRQSVTRRFSSGNEVIGAAYRARLTASVDVARLLL 26
           NAR   L  K+QRQSV   ++  + V   AY+ARLT  +D AR LL
Sbjct: 157 NARKCALDLKNQRQSVEHVWTMTSVVEEEAYKARLTVMLDTARFLL 202


>ref|XP_003553096.1| PREDICTED: zinc finger MYM-type protein 1-like [Glycine max]
          Length = 790

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = -2

Query: 340 NREWLEYSVSEDAAFCFYCYLFGDIKKRD----QAFTKKGFRNWKKALDKFRSHIGAESS 173
           N  WLEYS  +DAA+CFYC+LF    + +    + FTK G+R+WK A    + H+G+ +S
Sbjct: 96  NYTWLEYSEIKDAAYCFYCFLFKQPGRAEHFGFEVFTKSGYRDWKHASQGLKGHVGSHNS 155

Query: 172 IHNNARTLYLGFKDQRQSVTRRFSSGNEVIGAAYRARLTASVDVARLLL 26
           +HN+    Y  + +QRQSVT +F+   +     Y+ RLT S+D +R L+
Sbjct: 156 LHNSCVKHYNDYNNQRQSVTSKFAKATKESEELYKIRLTCSLDCSRYLI 204


Top