BLASTX nr result
ID: Cnidium21_contig00030909
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00030909
(1762 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2... 629 e-177
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 603 e-170
emb|CBI33509.3| unnamed protein product [Vitis vinifera] 601 e-169
ref|XP_004140360.1| PREDICTED: DNA repair protein complementing ... 587 e-165
ref|XP_004155756.1| PREDICTED: DNA repair protein complementing ... 587 e-165
>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
predicted protein [Populus trichocarpa]
Length = 868
Score = 629 bits (1621), Expect = e-177
Identities = 321/516 (62%), Positives = 375/516 (72%), Gaps = 6/516 (1%)
Frame = -2
Query: 1704 SKEIRRVRSV--EPPTSQGISVAIGSRKVGAPLYWAEVYCSGENLTGKWVHVDAVNAIID 1531
S +R+R + E +SQGIS A+GSRK+G+PLYWAEVYCSGENLTGKWVHVDAV+ I+D
Sbjct: 378 SSPFKRIRKIANEESSSQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVD 437
Query: 1530 GEQKVEAAIAACKTSLRYAVAFAGDGAKDVTRRYCMKWYKIASERINMKWWDAVLAPLKE 1351
GEQKVEAA ACKTSLRY VAFAG GAKDVTRRYCMKWYKIAS+R+N WWDAVLAPL+E
Sbjct: 438 GEQKVEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRE 497
Query: 1350 LELIATENMLKRQ----EGLNKHEKTETTGMLDSSGPAKSVAECSIENSYGVSRSCLEDI 1183
LE AT M + + N+HE +G+ NS+ +R+ +ED+
Sbjct: 498 LESGATGGMAHLEKPHADASNEHENVIASGL----------------NSFAATRNTIEDM 541
Query: 1182 ELETRALTEPLPTNQQAYKNHPLYALERWLTKCQILHPRGPIIGFCSSHPVYPRTCVQVL 1003
EL+TRALTEPLPTNQQAYKNH LYA+E+WLTKCQILHP+GPI+GFCS HPVYPR CVQ L
Sbjct: 542 ELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTL 601
Query: 1002 RTKERWLREGLQLKANELPVKVLKRSPKQNKEQASEADDYDEGDNSGRDTALYGEWQTEP 823
RTKERWLREGLQ+K ELP KV+K+S K K Q SE DDY E D+ + LYG WQ EP
Sbjct: 602 RTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDYGETDSGVVE--LYGMWQLEP 659
Query: 822 LQLPHAVDGIVPRNERGQVDVWSEKCLPPGTVHLRFPGLVPIAERLKIDFAPAMVGFEFR 643
LQLPHAV+GIVP+NERGQVDVWSEKCLPPGTVHLR P + +A+RL+ID+APAMVGFEFR
Sbjct: 660 LQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFR 719
Query: 642 NGRSVPVYEGIVVCTEFKDAILEVYAKXXXXXXXXXXXXXESQAISRWYQLLSSIVTRQR 463
NGRSVPV++GIVVC EFKDAILE YA+ E+QAISRWYQLLSSI+TRQR
Sbjct: 720 NGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQR 779
Query: 462 LKNRYGDGSASQSVTYASNPSVGSDARVSDDKDAAKQTSKSQPRNLHVWKENAQQPETVD 283
L N YG+G Q + N + D V + Q K NA D
Sbjct: 780 LNNSYGNGLLPQMPSNVQNTNNQPDVHVGSTQPPGHQKDAKDR------KLNAPSMTLTD 833
Query: 282 EHEHVFLTDDQTTGDEESSTRIKRCHCGFYIEVEVL 175
+HEHVFL +DQ+ DEE+STR KRCHCGF ++VE L
Sbjct: 834 DHEHVFLVEDQSF-DEETSTRTKRCHCGFSVQVEEL 868
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 603 bits (1554), Expect = e-170
Identities = 315/512 (61%), Positives = 374/512 (73%), Gaps = 3/512 (0%)
Frame = -2
Query: 1701 KEIRRVRSVEPPT-SQGISVAIGSRKVGAPLYWAEVYCSGENLTGKWVHVDAVNAIIDGE 1525
K ++R++ E PT SQGIS A+GSRK+GAPLYWAEV+C+GENLTGKWVH+DA+NAIIDGE
Sbjct: 615 KRVKRIKIEEYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGE 674
Query: 1524 QKVEAAIAACKTSLRYAVAFAGDGAKDVTRRYCMKWYKIASERINMKWWDAVLAPLKELE 1345
+KVEAA AACKTSLRY VAF+G+GAKDVTRRYCMKWY+IAS+RIN WWDAVLAPLKELE
Sbjct: 675 EKVEAAAAACKTSLRYVVAFSGNGAKDVTRRYCMKWYRIASQRINSAWWDAVLAPLKELE 734
Query: 1344 LIATENMLKRQEGLNKHEKTETTGMLDSSGPAKSVAECSIENSYGVSRSCLEDIELETRA 1165
A + +E + K AE S N++ +R LED+ELETRA
Sbjct: 735 AGAVGGVEVLKENVKKVR-----------------AESSDRNAFVATRDSLEDMELETRA 777
Query: 1164 LTEPLPTNQQAYKNHPLYALERWLTKCQILHPRGPIIGFCSSHPVYPRTCVQVLRTKERW 985
LTEPLPTNQQAYKNH LYA+ERWLTK QILHP+GP++GFCS HPVYPRTCVQ L+TK+RW
Sbjct: 778 LTEPLPTNQQAYKNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQTLKTKQRW 837
Query: 984 LREGLQLKANELPVKVLKRSPKQNKEQASEADDYDEGDNSGRDTALYGEWQTEPLQLPHA 805
LREGLQ+KA+E P KVLK S K +K QA EA DY + D G ALYG WQ EPL LP A
Sbjct: 838 LREGLQVKADEHPTKVLKCSSKLSKVQALEAVDYGDADPGGT-IALYGRWQMEPLCLPCA 896
Query: 804 VDGIVPRNERGQVDVWSEKCLPPGTVHLRFPGLVPIAERLKIDFAPAMVGFEFRNGRSVP 625
V+GIVP+NE GQVDVWSEKCLPPGTVHLR P +VPIA++L+IDFAPAMVGFEFRNGRS+P
Sbjct: 897 VNGIVPKNEWGQVDVWSEKCLPPGTVHLRVPRVVPIAKKLEIDFAPAMVGFEFRNGRSIP 956
Query: 624 VYEGIVVCTEFKDAILEVYAKXXXXXXXXXXXXXESQAISRWYQLLSSIVTRQRLKNRYG 445
V++GIVVC EFKD ILEVYA E+ A+SRWYQLLSSIV RQRL N YG
Sbjct: 957 VFDGIVVCAEFKDTILEVYADEEERRQAEEKRGIEAHAVSRWYQLLSSIVIRQRLNNSYG 1016
Query: 444 DGSASQSVTYASNPSVGSDARVSDDKDAAKQTSKSQPRNLHVWKENAQQPETV--DEHEH 271
+G S + + S +V + +D +Q + Q +V N P V ++HEH
Sbjct: 1017 NGLLSDTSNGIKKVNNRSSWQV-EGRDNDRQFLECQQG--YVEDTNLDPPSMVFREDHEH 1073
Query: 270 VFLTDDQTTGDEESSTRIKRCHCGFYIEVEVL 175
VF+ ++ DEE+ R KRC CGF I+VE L
Sbjct: 1074 VFIAEEGF--DEENLVRTKRCGCGFSIQVEEL 1103
>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
Length = 866
Score = 601 bits (1550), Expect = e-169
Identities = 315/512 (61%), Positives = 375/512 (73%), Gaps = 3/512 (0%)
Frame = -2
Query: 1701 KEIRRVRSVEPPT-SQGISVAIGSRKVGAPLYWAEVYCSGENLTGKWVHVDAVNAIIDGE 1525
++++R++ E PT SQGIS A+GSRK+GAPLYWAEV+C+GENLTGKWVH+DA+NAIIDGE
Sbjct: 369 QQVKRIKIEEYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGE 428
Query: 1524 QKVEAAIAACKTSLRYAVAFAGDGAKDVTRRYCMKWYKIASERINMKWWDAVLAPLKELE 1345
+KVEAA AACKTSLRY VAF+G+GAKDVTRRYCMKWY+IAS+RIN WWDAVLAPLKELE
Sbjct: 429 EKVEAAAAACKTSLRYVVAFSGNGAKDVTRRYCMKWYRIASQRINSAWWDAVLAPLKELE 488
Query: 1344 LIATENMLKRQEGLNKHEKTETTGMLDSSGPAKSVAECSIENSYGVSRSCLEDIELETRA 1165
A + + L E K AE S N++ +R LED+ELETRA
Sbjct: 489 AGAVGDHVTCPGKLGVEVLKENV--------KKVRAESSDRNAFVATRDSLEDMELETRA 540
Query: 1164 LTEPLPTNQQAYKNHPLYALERWLTKCQILHPRGPIIGFCSSHPVYPRTCVQVLRTKERW 985
LTEPLPTNQQAYKNH LYA+ERWLTK QILHP+GP++GFCS HPVYPRTCVQ L+TK+RW
Sbjct: 541 LTEPLPTNQQAYKNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQTLKTKQRW 600
Query: 984 LREGLQLKANELPVKVLKRSPKQNKEQASEADDYDEGDNSGRDTALYGEWQTEPLQLPHA 805
LREGLQ+KA+E P KVLK S K +K QA EA DY + D G ALYG WQ EPL LP A
Sbjct: 601 LREGLQVKADEHPTKVLKCSSKLSKVQALEAVDYGDADPGGT-IALYGRWQMEPLCLPCA 659
Query: 804 VDGIVPRNERGQVDVWSEKCLPPGTVHLRFPGLVPIAERLKIDFAPAMVGFEFRNGRSVP 625
V+GIVP+NE GQVDVWSEKCLPPGTVHLR P +VPIA++L+IDFAPAMVGFEFRNGRS+P
Sbjct: 660 VNGIVPKNEWGQVDVWSEKCLPPGTVHLRVPRVVPIAKKLEIDFAPAMVGFEFRNGRSIP 719
Query: 624 VYEGIVVCTEFKDAILEVYAKXXXXXXXXXXXXXESQAISRWYQLLSSIVTRQRLKNRYG 445
V++GIVVC EFKD ILEVYA E+ A+SRWYQLLSSIV RQRL N YG
Sbjct: 720 VFDGIVVCAEFKDTILEVYADEEERRQAEEKRGIEAHAVSRWYQLLSSIVIRQRLNNSYG 779
Query: 444 DGSASQSVTYASNPSVGSDARVSDDKDAAKQTSKSQPRNLHVWKENAQQPETV--DEHEH 271
+G S + + S +V + +D +Q + Q +V N P V ++HEH
Sbjct: 780 NGLLSDTSNGIKKVNNRSSWQV-EGRDNDRQFLECQQG--YVEDTNLDPPSMVFREDHEH 836
Query: 270 VFLTDDQTTGDEESSTRIKRCHCGFYIEVEVL 175
VF+ ++ DEE+ R KRC CGF I+VE L
Sbjct: 837 VFIAEEGF--DEENLVRTKRCGCGFSIQVEEL 866
>ref|XP_004140360.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
sativus]
Length = 923
Score = 587 bits (1513), Expect = e-165
Identities = 309/528 (58%), Positives = 371/528 (70%), Gaps = 9/528 (1%)
Frame = -2
Query: 1731 PYTFPSRMSSKEIRRVRSVEPPTSQGISVAIGSRKVGAPLYWAEVYCSGENLTGKWVHVD 1552
P FP SK+++R+ + E +S GIS A+GS K G+PLYWAEVYC+ ENLTGKWVH+D
Sbjct: 426 PLNFPP---SKKLKRIVNEESASSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHID 482
Query: 1551 AVNAIIDGEQKVEAAIAACKTSLRYAVAFAGDGAKDVTRRYCMKWYKIASERINMKWWDA 1372
AVN ++DGE KVE AACKTSLRY VAF+G GAKDVTRRYCMKWYKI ++R+N WWD
Sbjct: 483 AVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNTLWWDN 542
Query: 1371 VLAPLKELELIATENMLKRQEGLNKHEKTETTGMLDSSGPAKSVAECSIENSYGVSRSCL 1192
VLAPL+ LE A G K + + G++ + S+ N +R L
Sbjct: 543 VLAPLRILEGQAVR-------GTGKSDHNVSEGLVTDR-------DFSLGNQVA-TRDHL 587
Query: 1191 EDIELETRALTEPLPTNQQAYKNHPLYALERWLTKCQILHPRGPIIGFCSSHPVYPRTCV 1012
EDIELETRALTEPLPTNQQAYKNH LYALE+WLTK QILHP+GP++GFCS +PVYPRTCV
Sbjct: 588 EDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCV 647
Query: 1011 QVLRTKERWLREGLQLKANELPVKVLKRSPKQNKEQASEADDYDEGDNSGRDTALYGEWQ 832
QVL+TK +WLREGLQ+++NELPVK LKRS K+ K SEADD+D+GD+ G LYG+WQ
Sbjct: 648 QVLKTKHKWLREGLQVRSNELPVKELKRSIKKIKILESEADDFDQGDSQGT-IPLYGKWQ 706
Query: 831 TEPLQLPHAVDGIVPRNERGQVDVWSEKCLPPGTVHLRFPGLVPIAERLKIDFAPAMVGF 652
EPLQLP AVDGIVP+NERGQVDVWSEKCLPPGTVH+R P + +A++L+ID+APAMVGF
Sbjct: 707 LEPLQLPRAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGF 766
Query: 651 EFRNGRSVPVYEGIVVCTEFKDAILEVYAKXXXXXXXXXXXXXESQAISRWYQLLSSIVT 472
EFRNGRS P+Y+GIVVC+EFKD ILE Y + E QAISRWYQLLSSI+T
Sbjct: 767 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRLREKQAISRWYQLLSSIIT 826
Query: 471 RQRLKNRYGDGSASQSVTYASNPSVGSDARVSDDKDAAKQTS--------KSQPRNLHVW 316
RQRL +RYGD VT SD R D+ A S K QP NL
Sbjct: 827 RQRLNSRYGDSENLSQVT--------SDIRNMHDERNADVPSCQEDVEPFKGQPDNLS-- 876
Query: 315 KENAQQPETVD-EHEHVFLTDDQTTGDEESSTRIKRCHCGFYIEVEVL 175
N P ++ +H+HVFL +DQ DE+S KRCHCGF ++VE L
Sbjct: 877 NTNMDAPSFINQDHKHVFLLEDQIF-DEKSLVVTKRCHCGFSVQVEEL 923
>ref|XP_004155756.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Cucumis
sativus]
Length = 923
Score = 587 bits (1512), Expect = e-165
Identities = 309/528 (58%), Positives = 371/528 (70%), Gaps = 9/528 (1%)
Frame = -2
Query: 1731 PYTFPSRMSSKEIRRVRSVEPPTSQGISVAIGSRKVGAPLYWAEVYCSGENLTGKWVHVD 1552
P FP SK+++R+ + E +S GIS A+GS K G+PLYWAEVYC+ ENLTGKWVH+D
Sbjct: 426 PLNFPP---SKKLKRIVNEESASSHGISTAVGSSKEGSPLYWAEVYCNAENLTGKWVHID 482
Query: 1551 AVNAIIDGEQKVEAAIAACKTSLRYAVAFAGDGAKDVTRRYCMKWYKIASERINMKWWDA 1372
AVN ++DGE KVE AACKTSLRY VAF+G GAKDVTRRYCMKWYKI ++R+N WWD
Sbjct: 483 AVNMVVDGEHKVEDLAAACKTSLRYVVAFSGLGAKDVTRRYCMKWYKIEAKRVNNLWWDN 542
Query: 1371 VLAPLKELELIATENMLKRQEGLNKHEKTETTGMLDSSGPAKSVAECSIENSYGVSRSCL 1192
VLAPL+ LE A G K + + G++ + S+ N +R L
Sbjct: 543 VLAPLRILEGQAVR-------GTGKSDHNVSEGLVTDR-------DFSLGNQVA-TRDHL 587
Query: 1191 EDIELETRALTEPLPTNQQAYKNHPLYALERWLTKCQILHPRGPIIGFCSSHPVYPRTCV 1012
EDIELETRALTEPLPTNQQAYKNH LYALE+WLTK QILHP+GP++GFCS +PVYPRTCV
Sbjct: 588 EDIELETRALTEPLPTNQQAYKNHRLYALEKWLTKYQILHPKGPVLGFCSGYPVYPRTCV 647
Query: 1011 QVLRTKERWLREGLQLKANELPVKVLKRSPKQNKEQASEADDYDEGDNSGRDTALYGEWQ 832
QVL+TK +WLREGLQ+++NELPVK LKRS K+ K SEADD+D+GD+ G LYG+WQ
Sbjct: 648 QVLKTKHKWLREGLQVRSNELPVKELKRSIKKIKILESEADDFDQGDSQGT-IPLYGKWQ 706
Query: 831 TEPLQLPHAVDGIVPRNERGQVDVWSEKCLPPGTVHLRFPGLVPIAERLKIDFAPAMVGF 652
EPLQLP AVDGIVP+NERGQVDVWSEKCLPPGTVH+R P + +A++L+ID+APAMVGF
Sbjct: 707 LEPLQLPRAVDGIVPKNERGQVDVWSEKCLPPGTVHIRLPRVFSVAKKLEIDYAPAMVGF 766
Query: 651 EFRNGRSVPVYEGIVVCTEFKDAILEVYAKXXXXXXXXXXXXXESQAISRWYQLLSSIVT 472
EFRNGRS P+Y+GIVVC+EFKD ILE Y + E QAISRWYQLLSSI+T
Sbjct: 767 EFRNGRSYPIYDGIVVCSEFKDVILETYNEEAERMEAEERRLREKQAISRWYQLLSSIIT 826
Query: 471 RQRLKNRYGDGSASQSVTYASNPSVGSDARVSDDKDAAKQTS--------KSQPRNLHVW 316
RQRL +RYGD VT SD R D+ A S K QP NL
Sbjct: 827 RQRLNSRYGDSENLSQVT--------SDIRDMHDERNADVPSCQEDVEPFKGQPDNLS-- 876
Query: 315 KENAQQPETVD-EHEHVFLTDDQTTGDEESSTRIKRCHCGFYIEVEVL 175
N P ++ +H+HVFL +DQ DE+S KRCHCGF ++VE L
Sbjct: 877 NTNMDAPSFINQDHKHVFLLEDQIF-DEKSLVVTKRCHCGFSVQVEEL 923