BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030894
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   252   2e-64
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   191   5e-46
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   156   1e-35
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   149   1e-33
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   149   1e-33

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  252 bits (643), Expect = 2e-64
 Identities = 128/325 (39%), Positives = 188/325 (57%), Gaps = 6/325 (1%)
 Frame = -2

Query: 959  SVNGCLTTDMPENLKDVKVQNLFAENQEGWDEEILNDICNERDRELIKQIPIPGRRREDS 780
            + NG +++++PE L+D  V  +   N+  WD +IL D+ N RD+ LI+ IP+  R  EDS
Sbjct: 337  NANGMVSSEIPEGLEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDS 396

Query: 779  WFWLFDAKGNFTVRSCYRRLRGESECLNGVFWRKLWGLRLPGKVINLIWRACRSCLPTAT 600
            W+WLFD KGN+ V++CYR L+G+       FW K W L++P KV NL+W+ C +C+ TA 
Sbjct: 397  WYWLFDDKGNYLVKNCYRLLQGDLGRPETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAM 456

Query: 599  ALAGKNVNVPMLCSWCQTCAENDIHVLFQCVFAREVWESAGLS-NLVTVGPNDNVLAVMK 423
             L  + V++  LC WC    E   HVLF C  ARE W+  G   +  T  P   + + ++
Sbjct: 457  NLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTESP---ICSWIQ 513

Query: 422  RVFQIGRNDQILMVALLCWSIWQRRNTWVWQCVNMSSFGVKSKVCNMLVEWQRSR----- 258
              F     D    +AL+C S+W +RN WVW   + +++GV S   N L+E QR+R     
Sbjct: 514  NFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISP-ANQLLE-QRTRAQSAD 571

Query: 257  EEQVAITAQQRPGNRRWCKPPAGWIKVNTDAACLMGSNKVGVGCVIRDERGKFLRARSNV 78
            EE            R+W KP  GW+K+NTD A  +   ++G+GCV+RD  G+ + ARS  
Sbjct: 572  EEIAPPLGHNTDVTRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSER 631

Query: 77   VQGGLQPREAEAIGLKEALSWTKNW 3
              G    REAEA+ +KEALS+ K++
Sbjct: 632  RVGRFTAREAEALSMKEALSYMKDY 656


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  191 bits (484), Expect = 5e-46
 Identities = 119/338 (35%), Positives = 164/338 (48%), Gaps = 10/338 (2%)
 Frame = -2

Query: 998  TSTKVWQVPWLPCSVNGCLTTDMPENLKDVKVQNLFAENQEGWDEEILNDICNERDRELI 819
            T  +VW   WLP S N  + T        +KV  L  E    W E+ + D    RD +LI
Sbjct: 398  TKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELITEGL--WREDFIRDKFMARDADLI 455

Query: 818  KQIPIPGRRREDSWFWLFDAKGNFTVRSCYRRLRG--------ESECLNGVFWRKLWGLR 663
              IP+P   RED   W FDA+G +T RS Y  LR          S+  +   W +LW + 
Sbjct: 456  LSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVT 515

Query: 662  LPGKVINLIWRACRSCLPTATALAGKNVNVPMLCSWCQTCAENDIHVLFQCVFAREVWES 483
             P K++N  WRA R+CLPT  AL  ++V+ PM C  C++  E  +H L +CV AR+VW+ 
Sbjct: 516  APPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDE 575

Query: 482  AGLSNLV-TVGPNDNVLAVMKRVFQIGRNDQILMVALLCWSIWQRRNTWVWQCVNMSSFG 306
            +GL+ L    G   + LA M          + L V   CW +W RRN  VW      S  
Sbjct: 576  SGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAV---CWGLWWRRNDVVWNGRIWHSQQ 632

Query: 305  VKSKVCNMLVEWQRSREEQVAITAQQRPG-NRRWCKPPAGWIKVNTDAACLMGSNKVGVG 129
            V +    ML  W  + E     TA   P  + +W KP  GWIK+N D A     +K  +G
Sbjct: 633  VVNGCFTMLESWFHANE--TLATAVTVPSYSSKWQKPDYGWIKINVDGAVF--PDKGAIG 688

Query: 128  CVIRDERGKFLRARSNVVQGGLQPREAEAIGLKEALSW 15
             V RD +G+F+   +        P+  EA+G++E LSW
Sbjct: 689  AVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSW 726


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 483

 Score =  156 bits (395), Expect = 1e-35
 Identities = 100/324 (30%), Positives = 151/324 (46%), Gaps = 5/324 (1%)
 Frame = -2

Query: 971  WLPCSVNGCLTTDMPENLKDVKVQNLFAENQEGWDEEILNDICNERDRELIKQIPIPGRR 792
            WL  + NG + T++P+ L+   V +L       WD+EILND+ +ERD+ LI  I +    
Sbjct: 86   WLLDASNGFIETNLPDELRLQPVCSLLKPGTCDWDQEILNDLFSERDKNLINSIVLSPTV 145

Query: 791  REDSWFWLFDAKGNFTVRSCYRRLRGESECL---NGVFWRKLWGLRLPGKVINLIWRACR 621
              D  FW  D KG F+V+  YR  + +   L   N V WR+LW L +  K    +WRA  
Sbjct: 146  GTDQLFWFKDPKGKFSVKDVYRVQQPDFSVLYPSNVVVWRRLWKLNIAAKCKVFMWRALT 205

Query: 620  SCLPTATALAGKNVNVPMLCSWCQTCAENDIHVLFQCVFAREVWESAGLSNLVTVGPNDN 441
            + LP  T L  + V     C  C +  E  +H+L  C    + W+   L   ++     N
Sbjct: 206  NRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLS--QVSN 263

Query: 440  VLAVMKRVFQIGRNDQILMVALLCWSIWQRRNTWVWQCVNMSSFGVKSKVCNMLVEWQRS 261
            +L   + VF+   +  +    +L WS+W   N  VW    +S   V S+  + L +W ++
Sbjct: 264  LLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKA 323

Query: 260  RE--EQVAITAQQRPGNRRWCKPPAGWIKVNTDAACLMGSNKVGVGCVIRDERGKFLRAR 87
            R+  +   +      G+  W KP  G  K+N DA+      K G   V+RD  G ++   
Sbjct: 324  RKLTDYHQLGRHFAGGDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGV 383

Query: 86   SNVVQGGLQPREAEAIGLKEALSW 15
              +      P  AEA  LKEALSW
Sbjct: 384  LIIRPYIANPDVAEAWALKEALSW 407


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  149 bits (377), Expect = 1e-33
 Identities = 85/292 (29%), Positives = 138/292 (47%), Gaps = 23/292 (7%)
 Frame = -2

Query: 821 IKQIPIPGRRREDSWFWLFDAKGNFTVRSCYR----RLRGESECLNGVFWRKLWGLRLPG 654
           I   P+  + + DS  W  +  G ++V+S YR     +   +      +W  +W L++P 
Sbjct: 7   ILNTPLYSQVQTDSLLWKVEKNGCYSVKSAYRVCVEDVVNNAHLRKPGYWSGIWRLKVPP 66

Query: 653 KVINLIWRACRSCLPTATALAGKNVNVPMLCSWCQTCAENDIHVLFQCVFAREVWESAGL 474
           +V  L+WR CR C PT   L  + VN P  C  C+   E+  H+ F C  A +VW +A +
Sbjct: 67  RVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANV 126

Query: 473 SNLV--TVGPNDNVLAVMKRVFQIGRNDQILMVALLCWSIWQRRNTWVWQCVNMSSFGVK 300
            +L+  ++   DN   ++  + Q     Q+  +  + WSIW+ RN  +WQ V+ SS  + 
Sbjct: 127 WHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVTIL 186

Query: 299 SKVCNMLVEWQRSREEQVAI-----------------TAQQRPGNRRWCKPPAGWIKVNT 171
            +  ++L  W+++  +Q  +                     R GN RW KP +G +K N 
Sbjct: 187 ERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWRKPKSGRLKCNV 246

Query: 170 DAACLMGSNKVGVGCVIRDERGKFLRARSNVVQGGLQPREAEAIGLKEALSW 15
           DA+    SNKVG+G  IRD  G  +R+++            EA+GL  A  W
Sbjct: 247 DASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSPLCPVNIGEALGLYHATRW 298


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  149 bits (377), Expect = 1e-33
 Identities = 98/337 (29%), Positives = 152/337 (45%), Gaps = 7/337 (2%)
 Frame = -2

Query: 998  TSTKVWQVPWLPCSVNGCLTT---DMPENLKDVKVQNLFAENQEGWDEEILNDICNERDR 828
            T   VW   WL   V+G +      +PE  K++ V +LF      W+  +L ++ +  D 
Sbjct: 1332 TDICVWDQRWL---VDGGVLQKPESLPEEFKELTVADLFISQTRFWNVGLLRNLVSNEDT 1388

Query: 827  ELIKQIPI--PGRRREDSWFWLFDAKGNFTVRSCYRRLRGESECLNGVFWRKLWGLRLPG 654
              I   PI  P    +          GN                     W  LW L++P 
Sbjct: 1389 NRILNTPIFEPNHLSQHVDLSTHRCDGN---------------------WVLLWNLKVPP 1427

Query: 653  KVINLIWRACRSCLPTATALAGKNVNVPMLCSWCQTCAENDIHVLFQCVFAREVWESAGL 474
            KV   +WR+CR+ LPT   L  + VN    C+ C+   E+ +H+ F C  +R+ W+  GL
Sbjct: 1428 KVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGL 1487

Query: 473  SNLVTVGPNDNVL--AVMKRVFQIGRNDQILMVALLCWSIWQRRNTWVWQCVNMSSFGVK 300
             + V      N+     M  + Q   + Q ++ A + WSIW++RN  +W+   M++  V+
Sbjct: 1488 WSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTAAVR 1547

Query: 299  SKVCNMLVEWQRSREEQVAITAQQRPGNRRWCKPPAGWIKVNTDAACLMGSNKVGVGCVI 120
             +  N+L  WQ +++               W KP  G  K N DAA    SN+VG+G  I
Sbjct: 1548 DRGLNLLTGWQNAQD--------------IWRKPDEGHFKCNVDAAFFKESNRVGIGICI 1593

Query: 119  RDERGKFLRARSNVVQGGLQPREAEAIGLKEALSWTK 9
            RD+ G+ ++AR++     L   E EAIGL  A+ W K
Sbjct: 1594 RDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAK 1630