BLASTX nr result

ID: Cnidium21_contig00030890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030890
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   369   e-100
ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   365   9e-99
ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   350   4e-94
ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   338   2e-90

>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  369 bits (948), Expect = e-100
 Identities = 176/263 (66%), Positives = 207/263 (78%)
 Frame = +3

Query: 63   CDITESTANEGTAELEDSACLESGEVGDTAVKNPLDMQANTDFIFYRTDEKGTGRGSEIV 242
            C+ T STA E   E ++      G    + V+   +  + ++  FY TDEKG  +  +I 
Sbjct: 627  CNNTTSTAKEEITEKDNGCSASHGNANPSIVEEATNSSSYSELQFYITDEKGIVQDLKIG 686

Query: 243  MNEQITCITLPWRLNVIVCWPDRLVERRSTHLLSSLPETFKSGFLSKRPQESVSLYKCLE 422
            +NE +    +P R NV+VCW ++ +E+  T LLSSLPE FKSGFL+KRPQESVSLYKCLE
Sbjct: 687  INEPVPVTGVPKRFNVLVCWTEKQIEQYDTRLLSSLPEVFKSGFLAKRPQESVSLYKCLE 746

Query: 423  AFLKEEPLGPEDMWYCPVCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFLKNKLETYVD 602
            AFLKEEPLGP+DMW+CP CKKH QASKKLDLWRLPEILVIHLKRFSY+RF+KNKLE YVD
Sbjct: 747  AFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVD 806

Query: 603  FPVHDLDLSSYISFKNGDSSYRYMLYAISNHYGSMGGGHYTAFIHHGGNRWYDFDDSRVA 782
            FPV DLDLS+YIS+KNG  S+RYMLYAISNHYGSMGGGHYTAF+HHG  RWYDFDDS V 
Sbjct: 807  FPVDDLDLSAYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAFVHHGAGRWYDFDDSLVH 866

Query: 783  PISEDKIKSSAAYVLFYRRVQDV 851
            PIS+DKIK+SAAYVLFYRRV +V
Sbjct: 867  PISQDKIKTSAAYVLFYRRVVEV 889


>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
            vinifera]
          Length = 882

 Score =  365 bits (938), Expect = 9e-99
 Identities = 180/269 (66%), Positives = 217/269 (80%), Gaps = 2/269 (0%)
 Frame = +3

Query: 51   ITDICDITESTANEGTAELED--SACLESGEVGDTAVKNPLDMQANTDFIFYRTDEKGTG 224
            I++  D +E T  E   EL+D  S  L +G  G   +   +D  ++ +  FY TD+KG  
Sbjct: 618  ISNNSDSSEKTVIEEVKELKDAISPVLSAGVNGINEIW--VDPDSDAELQFYLTDDKGAT 675

Query: 225  RGSEIVMNEQITCITLPWRLNVIVCWPDRLVERRSTHLLSSLPETFKSGFLSKRPQESVS 404
            R S++VM+E +T   LP RLN++V WP++ +E+  THL+SSLPE FKSGF+++RPQESVS
Sbjct: 676  RASKLVMDEPVT--RLPRRLNLLVFWPEKKIEQYDTHLISSLPEIFKSGFIARRPQESVS 733

Query: 405  LYKCLEAFLKEEPLGPEDMWYCPVCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFLKNK 584
            LY+CLEAFLKEEPLGP+DMWYCP CK H QASKKLDLWRLPEILVIHLKRFSYSRF+KNK
Sbjct: 734  LYRCLEAFLKEEPLGPDDMWYCPGCKTHRQASKKLDLWRLPEILVIHLKRFSYSRFMKNK 793

Query: 585  LETYVDFPVHDLDLSSYISFKNGDSSYRYMLYAISNHYGSMGGGHYTAFIHHGGNRWYDF 764
            LETYVDFPV +LDLS+YI+ KNG  S RYMLYA+SNHYGSMGGGHYTAF+HHGG++WYDF
Sbjct: 794  LETYVDFPVDNLDLSTYITHKNGMVSNRYMLYAVSNHYGSMGGGHYTAFVHHGGDQWYDF 853

Query: 765  DDSRVAPISEDKIKSSAAYVLFYRRVQDV 851
            DDS V+PI EDKIK+SAAYVLFYRRV DV
Sbjct: 854  DDSHVSPIPEDKIKTSAAYVLFYRRVVDV 882


>ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|222847020|gb|EEE84567.1|
            predicted protein [Populus trichocarpa]
          Length = 624

 Score =  357 bits (916), Expect = 3e-96
 Identities = 170/259 (65%), Positives = 208/259 (80%)
 Frame = +3

Query: 66   DITESTANEGTAELEDSACLESGEVGDTAVKNPLDMQANTDFIFYRTDEKGTGRGSEIVM 245
            D+  +T  E    +++++    G+    + K  +++ ++++  FY TDEKG  +   IVM
Sbjct: 366  DLDSTTIEEVEGMVDNTSSSPDGDAKPCSAKG-VELPSDSELQFYLTDEKGMVKDENIVM 424

Query: 246  NEQITCITLPWRLNVIVCWPDRLVERRSTHLLSSLPETFKSGFLSKRPQESVSLYKCLEA 425
            NE +  I L  R NV+VCWP++L ++  T LLSSLPE FKSGF +KRPQESVSLY CLEA
Sbjct: 425  NEPVPKIGLHRRFNVLVCWPEKLTKQYDTSLLSSLPEIFKSGFFAKRPQESVSLYNCLEA 484

Query: 426  FLKEEPLGPEDMWYCPVCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFLKNKLETYVDF 605
            FLKEEPLGPEDMWYCP CK+H QASKKLDLWRLPEILVIHLKRFSY+   KNKLETYVDF
Sbjct: 485  FLKEEPLGPEDMWYCPSCKQHRQASKKLDLWRLPEILVIHLKRFSYTHSAKNKLETYVDF 544

Query: 606  PVHDLDLSSYISFKNGDSSYRYMLYAISNHYGSMGGGHYTAFIHHGGNRWYDFDDSRVAP 785
            PV DLDLS+++S+KNG  S+RYMLYAISNHYGSMGGGHYTAFIH+GG++WYDFDDS V+P
Sbjct: 545  PVDDLDLSTHLSYKNGQLSHRYMLYAISNHYGSMGGGHYTAFIHYGGDQWYDFDDSHVSP 604

Query: 786  ISEDKIKSSAAYVLFYRRV 842
            IS++KIK+SAAYVLFYRRV
Sbjct: 605  ISQEKIKTSAAYVLFYRRV 623


>ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
            sativus]
          Length = 877

 Score =  350 bits (898), Expect = 4e-94
 Identities = 172/265 (64%), Positives = 198/265 (74%)
 Frame = +3

Query: 48   NITDICDITESTANEGTAELEDSACLESGEVGDTAVKNPLDMQANTDFIFYRTDEKGTGR 227
            N T   D TE T  E       +  ++   + D    N     ++ D  FY TD+KG  R
Sbjct: 614  NHTSDVDTTEKTEVENGTSSTSACVIDPLTIEDGVNCNS---PSDADLQFYTTDDKGIIR 670

Query: 228  GSEIVMNEQITCITLPWRLNVIVCWPDRLVERRSTHLLSSLPETFKSGFLSKRPQESVSL 407
            GSEI + E +       RL V+V WP++ +ER  THLL+SLPE FKS F +KRPQESVSL
Sbjct: 671  GSEIEVGEFVVGSEKSKRLYVLVSWPEKQIERYDTHLLTSLPEVFKSSFFAKRPQESVSL 730

Query: 408  YKCLEAFLKEEPLGPEDMWYCPVCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFLKNKL 587
            YKCLEAFL+EEPLGPEDMWYCP CKKHCQASKKLDLWRLPEILVIHLKRFSYSRF+KNKL
Sbjct: 731  YKCLEAFLQEEPLGPEDMWYCPSCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFMKNKL 790

Query: 588  ETYVDFPVHDLDLSSYISFKNGDSSYRYMLYAISNHYGSMGGGHYTAFIHHGGNRWYDFD 767
            E YVDFPV DLDLS Y+++KNG S  RY+LYA+SNHYGSMGGGHYTAF+H GG++WY+FD
Sbjct: 791  EAYVDFPVDDLDLSMYVAYKNGQSCTRYVLYAVSNHYGSMGGGHYTAFVHQGGDQWYNFD 850

Query: 768  DSRVAPISEDKIKSSAAYVLFYRRV 842
            DS V PI  DKIKS AAYVLFYRRV
Sbjct: 851  DSNVYPIGLDKIKSCAAYVLFYRRV 875


>ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355485970|gb|AES67173.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 871

 Score =  338 bits (866), Expect = 2e-90
 Identities = 170/263 (64%), Positives = 202/263 (76%)
 Frame = +3

Query: 63   CDITESTANEGTAELEDSACLESGEVGDTAVKNPLDMQANTDFIFYRTDEKGTGRGSEIV 242
            C ++E T  E  AE+E  A     + G   + N LD  ++ +  FY TD+KGT + S+I+
Sbjct: 611  CVVSERT--EEVAEIEGVA-----DSGSDTIVNGLDTPSDGEMEFYITDDKGTVKNSKIL 663

Query: 243  MNEQITCITLPWRLNVIVCWPDRLVERRSTHLLSSLPETFKSGFLSKRPQESVSLYKCLE 422
            MNE +T       L+V+VCW ++ +++  T L SSLPE  KS FL+KRPQE VSLYKCLE
Sbjct: 664  MNEPLTVNGGLNPLHVLVCWSEKQIKKYDTQLSSSLPEVCKSSFLAKRPQEPVSLYKCLE 723

Query: 423  AFLKEEPLGPEDMWYCPVCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFLKNKLETYVD 602
             FL+EEPLGPEDMWYCP CK H QASKKLDLWRLPEILVIHLKRF YSRF+KNKLET VD
Sbjct: 724  TFLQEEPLGPEDMWYCPGCKNHRQASKKLDLWRLPEILVIHLKRFQYSRFMKNKLETLVD 783

Query: 603  FPVHDLDLSSYISFKNGDSSYRYMLYAISNHYGSMGGGHYTAFIHHGGNRWYDFDDSRVA 782
            FPV +LDLSSYI+  N   SY Y LYAISNH+GSMGGGHYTAF+HHGG++WYDFDDSRV 
Sbjct: 784  FPVDNLDLSSYITHGN-QKSYHYTLYAISNHFGSMGGGHYTAFVHHGGDQWYDFDDSRVY 842

Query: 783  PISEDKIKSSAAYVLFYRRVQDV 851
            PIS++KIKSSAAYVLFYRRV +V
Sbjct: 843  PISKEKIKSSAAYVLFYRRVSEV 865


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