BLASTX nr result

ID: Cnidium21_contig00030878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030878
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   183   2e-44
emb|CBI21507.3| unnamed protein product [Vitis vinifera]              183   2e-44
ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|2...   178   7e-43
ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|...   170   2e-40
ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   166   2e-39

>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  183 bits (465), Expect = 2e-44
 Identities = 83/131 (63%), Positives = 102/131 (77%)
 Frame = -3

Query: 594 YNVGNGEWGRSVPKRLDLGWRGRAAVVSGVMYCYDFLGKIRGYDVEKDAWKELRGVEKSL 415
           +  G  EWG  V   LDLGWRGRA VV GV+YCYD+LGKIRG+DV++  WKEL+G+EK L
Sbjct: 230 FEPGTAEWG-GVSTELDLGWRGRACVVDGVLYCYDYLGKIRGFDVKEGLWKELKGLEKGL 288

Query: 414 PKFLCGATMASLNGKLCVVWERKGGKKEVEIMCAEIEVWKDEDGGLSGLVLWSDVVLRVP 235
           PKFLCGATMA++ G L V+WE KG  KE+EI CAEI + K  DGGL G ++WSDV+L VP
Sbjct: 289 PKFLCGATMANVGGNLVVLWEGKGNGKEMEISCAEIAIQKCSDGGLRGSIVWSDVILSVP 348

Query: 234 FGSSVVHCLSV 202
            GS++VHCL+V
Sbjct: 349 IGSAIVHCLAV 359


>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  183 bits (464), Expect = 2e-44
 Identities = 83/128 (64%), Positives = 101/128 (78%)
 Frame = -3

Query: 585 GNGEWGRSVPKRLDLGWRGRAAVVSGVMYCYDFLGKIRGYDVEKDAWKELRGVEKSLPKF 406
           G  EWG  V   LDLGWRGRA VV GV+YCYD+LGKIRG+DV++  WKEL+G+EK LPKF
Sbjct: 216 GTAEWG-GVSTELDLGWRGRACVVDGVLYCYDYLGKIRGFDVKEGLWKELKGLEKGLPKF 274

Query: 405 LCGATMASLNGKLCVVWERKGGKKEVEIMCAEIEVWKDEDGGLSGLVLWSDVVLRVPFGS 226
           LCGATMA++ G L V+WE KG  KE+EI CAEI + K  DGGL G ++WSDV+L VP GS
Sbjct: 275 LCGATMANVGGNLVVLWEGKGNGKEMEISCAEIAIQKCSDGGLRGSIVWSDVILSVPIGS 334

Query: 225 SVVHCLSV 202
           ++VHCL+V
Sbjct: 335 AIVHCLAV 342


>ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|222852932|gb|EEE90479.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  178 bits (451), Expect = 7e-43
 Identities = 81/123 (65%), Positives = 99/123 (80%)
 Frame = -3

Query: 564 SVPKRLDLGWRGRAAVVSGVMYCYDFLGKIRGYDVEKDAWKELRGVEKSLPKFLCGATMA 385
           SV   LDLGWRGRA VV+G++YCYD++G IRG+DV   AWKELRGVEK LP+FLCGATMA
Sbjct: 240 SVESELDLGWRGRACVVNGILYCYDYVGNIRGFDVRNGAWKELRGVEKELPRFLCGATMA 299

Query: 384 SLNGKLCVVWERKGGKKEVEIMCAEIEVWKDEDGGLSGLVLWSDVVLRVPFGSSVVHCLS 205
           ++ GKL VVWERKG  KE+E+ CAEIEV ++ +G L G V W DVV +VP GSS+VHCL+
Sbjct: 300 NVGGKLVVVWERKGNVKEMEVWCAEIEVEENGEGELRGRVEWCDVVHKVPIGSSIVHCLA 359

Query: 204 VDL 196
           V +
Sbjct: 360 VSM 362


>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
           gi|223528032|gb|EEF30112.1| Protein AFR, putative
           [Ricinus communis]
          Length = 370

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/134 (62%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
 Frame = -3

Query: 594 YNVGNGEWGRSVPKRLDLGWRGRAAVVSGVMYCYDFLGKIRGYDVEKDAWKELRGVEKSL 415
           Y+  N +W  SV   LD GWRGRA VV G+++ YDFLGKI+G+DVEKD+WKELRGVEK L
Sbjct: 238 YDPRNRKW-ESVGVELDSGWRGRACVVDGILFNYDFLGKIKGFDVEKDSWKELRGVEKEL 296

Query: 414 PKFLCGATMASLNGKLCVVWERKGGKKEVEIMCAEIEV-WKDEDGGLSGLVLWSDVVLRV 238
           P FL GATMA++ GKL VVWE+KG  KE+EI CAEIEV  K ED  + G + W DV+ +V
Sbjct: 297 PTFLAGATMANVGGKLVVVWEKKGNGKELEIWCAEIEVEKKGEDQEIWGKIKWCDVIHKV 356

Query: 237 PFGSSVVHCLSVDL 196
           P GSS+VHCL+V L
Sbjct: 357 PIGSSIVHCLAVTL 370


>ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 362

 Score =  166 bits (421), Expect = 2e-39
 Identities = 79/133 (59%), Positives = 98/133 (73%)
 Frame = -3

Query: 594 YNVGNGEWGRSVPKRLDLGWRGRAAVVSGVMYCYDFLGKIRGYDVEKDAWKELRGVEKSL 415
           Y   +G W  SV   LD GWRGRA VV G++YCYD+LGKI+G+DV +  W+EL+G+EK L
Sbjct: 231 YEPSSGAW-ESVGVELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGL 289

Query: 414 PKFLCGATMASLNGKLCVVWERKGGKKEVEIMCAEIEVWKDEDGGLSGLVLWSDVVLRVP 235
           P+FLCGATMA L GKLCVVWE +G + E+EI CAEI V K+ DG L G ++W   VL VP
Sbjct: 290 PRFLCGATMADLGGKLCVVWECQGNENEMEIWCAEIGVKKNSDGELWGQLVWFGKVLSVP 349

Query: 234 FGSSVVHCLSVDL 196
            GSS+V+C SV L
Sbjct: 350 KGSSIVNCSSVSL 362


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