BLASTX nr result

ID: Cnidium21_contig00030867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030867
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   216   2e-54
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   216   2e-54
dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]    215   3e-54
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   214   8e-54
ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B...   213   1e-53

>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  216 bits (550), Expect = 2e-54
 Identities = 107/128 (83%), Positives = 118/128 (92%)
 Frame = -3

Query: 426 QVKYADGELERLEHKLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRGSQQTSKGCAFLK 247
           QVKYADGELERLEHKLFVGMLPKNV+E EVS LFS+YG IKDLQILRGSQQTSKGCAFLK
Sbjct: 90  QVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLK 149

Query: 246 YDTKEQAVAAIEALNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQ 67
           Y+TKEQA+AA+EA+NG H+MEGS+VPLVVKWADTEKER AR+AQKAQSQ  N+ +ADS Q
Sbjct: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQ 209

Query: 66  HSSLFGAL 43
           H SLFGAL
Sbjct: 210 HPSLFGAL 217



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 KLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRG-SQQTSKGCAFLKYDTKEQAVAAIEA 208
           KLFVG +PKN+TE ++  +F ++  + ++ I++  + + S+GC F+   ++++A  A+ A
Sbjct: 16  KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75

Query: 207 LNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQHSSLFGAL 43
            +    + G++ PL VK+AD E ERL  +       P N++ A+     S +G +
Sbjct: 76  CHNKRTLPGASSPLQVKYADGELERLEHKLFVGM-LPKNVSEAEVSSLFSKYGTI 129


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  216 bits (550), Expect = 2e-54
 Identities = 107/128 (83%), Positives = 118/128 (92%)
 Frame = -3

Query: 426 QVKYADGELERLEHKLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRGSQQTSKGCAFLK 247
           QVKYADGELERLEHKLFVGMLPKNV+E EVS LFS+YG IKDLQILRGSQQTSKGCAFLK
Sbjct: 144 QVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLK 203

Query: 246 YDTKEQAVAAIEALNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQ 67
           Y+TKEQA+AA+EA+NG H+MEGS+VPLVVKWADTEKER AR+AQKAQSQ  N+ +ADS Q
Sbjct: 204 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQ 263

Query: 66  HSSLFGAL 43
           H SLFGAL
Sbjct: 264 HPSLFGAL 271


>dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 467

 Score =  215 bits (548), Expect = 3e-54
 Identities = 108/129 (83%), Positives = 121/129 (93%), Gaps = 1/129 (0%)
 Frame = -3

Query: 426 QVKYADGELERLEHKLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRGSQQTSK-GCAFL 250
           QVKYADGELERLEHKLF+GMLPKNVT+VE++DLFSQYG+IKDLQILRGSQQTSK GCAFL
Sbjct: 122 QVKYADGELERLEHKLFIGMLPKNVTDVEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFL 181

Query: 249 KYDTKEQAVAAIEALNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQ 70
           KY+TKEQAVAAIEALNG H++EGS+VPLVVKWADTEKER AR+AQKAQ  P NM+NA++ 
Sbjct: 182 KYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQYPPSNMSNANAM 241

Query: 69  QHSSLFGAL 43
           Q SSLFGAL
Sbjct: 242 QQSSLFGAL 250



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 384 KLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRG-SQQTSKGCAFLKYDTKEQAVAAIEA 208
           KLFVG +PK +TE E++ +F     + ++ ++R  + + S+GC FL   ++E+A  A+ A
Sbjct: 48  KLFVGQVPKLMTEAELAAMFRDVAIVDEVTVIRDKATKASRGCCFLICPSREEADKAVNA 107

Query: 207 LNGNHRMEGSTVPLVVKWADTEKERLARR 121
            +    + G+  PL VK+AD E ERL  +
Sbjct: 108 YHNKRTLPGAPSPLQVKYADGELERLEHK 136


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  214 bits (544), Expect = 8e-54
 Identities = 108/128 (84%), Positives = 117/128 (91%)
 Frame = -3

Query: 426 QVKYADGELERLEHKLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRGSQQTSKGCAFLK 247
           QVKYADGELERLEHKLFVGMLPKNV+E EVS+LFS YG IKDLQILRGSQQTSKGCAFLK
Sbjct: 90  QVKYADGELERLEHKLFVGMLPKNVSEAEVSELFSTYGTIKDLQILRGSQQTSKGCAFLK 149

Query: 246 YDTKEQAVAAIEALNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQ 67
           Y+TKEQA+AA+EA+NG H+MEGS+VPLVVKWADTEKER ARRAQK QSQ  N+ NADS Q
Sbjct: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKVQSQASNLPNADS-Q 208

Query: 66  HSSLFGAL 43
           H SLFGAL
Sbjct: 209 HPSLFGAL 216



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/115 (30%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 KLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRG-SQQTSKGCAFLKYDTKEQAVAAIEA 208
           KLFVG +PK++TEV++  +F ++  + ++ I++  + + S+GC F+   ++++A  A+ A
Sbjct: 16  KLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75

Query: 207 LNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQHSSLFGAL 43
            +    + G++ PL VK+AD E ERL  +       P N++ A+  +  S +G +
Sbjct: 76  CHNKKTLPGASSPLQVKYADGELERLEHKLFVGM-LPKNVSEAEVSELFSTYGTI 129


>ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
          Length = 429

 Score =  213 bits (542), Expect = 1e-53
 Identities = 108/128 (84%), Positives = 116/128 (90%)
 Frame = -3

Query: 426 QVKYADGELERLEHKLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRGSQQTSKGCAFLK 247
           QVKYADGELERLEHKLF+GMLPKN++E EVSDLFS YG IKDLQILRGSQQTSKGCAFLK
Sbjct: 91  QVKYADGELERLEHKLFIGMLPKNISEDEVSDLFSMYGTIKDLQILRGSQQTSKGCAFLK 150

Query: 246 YDTKEQAVAAIEALNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQ 67
           Y+TKEQA+AA+EA+NG H MEGS+VPLVVKWADTEKERLARRAQKAQSQ  NM  AD  Q
Sbjct: 151 YETKEQALAALEAINGKHTMEGSSVPLVVKWADTEKERLARRAQKAQSQVSNMPQAD-PQ 209

Query: 66  HSSLFGAL 43
           H SLFGAL
Sbjct: 210 HPSLFGAL 217



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 KLFVGMLPKNVTEVEVSDLFSQYGDIKDLQILRG-SQQTSKGCAFLKYDTKEQAVAAIEA 208
           KLFVG +PK + E EV  +F ++  + ++ I+R  + + S+GC F+   ++E+A  A+ A
Sbjct: 17  KLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCFVICPSREEADKAVNA 76

Query: 207 LNGNHRMEGSTVPLVVKWADTEKERLARRAQKAQSQPLNMANADSQQHSSLFGAL 43
            +    + G++ PL VK+AD E ERL  +       P N++  +     S++G +
Sbjct: 77  CHNKKTLPGASSPLQVKYADGELERLEHKLFIGM-LPKNISEDEVSDLFSMYGTI 130


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