BLASTX nr result

ID: Cnidium21_contig00030840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030840
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55435.1| PH01B031C15.18 [Phyllostachys edulis]                  98   9e-34
gb|AAM01138.1|AC108884_20 Putative transposase [Oryza sativa Jap...    98   8e-33
gb|AAV24780.1| putative polyprotein [Oryza sativa Japonica Group]     100   1e-32
gb|AAT58820.1| unknown protein [Oryza sativa Japonica Group]          100   1e-32
gb|ABA94078.1| transposon protein, putative, CACTA, En/Spm sub-c...   101   1e-32

>emb|CCI55435.1| PH01B031C15.18 [Phyllostachys edulis]
          Length = 1369

 Score = 97.8 bits (242), Expect(2) = 9e-34
 Identities = 41/82 (50%), Positives = 62/82 (75%)
 Frame = -2

Query: 385 LQNDIIVTLCEFEMYFTVALFDIMVHLVIHLVRDIKLCSPLYLWQMYPFERFVCTLKAYV 206
           LQ++++ TLC+ EMYF  + FDIMVHL++H+VR+IK+  P++L  +Y FERF+  LK+YV
Sbjct: 447 LQDEVVTTLCDLEMYFPPSFFDIMVHLIVHIVREIKMYGPVFLRSIYSFERFMGILKSYV 506

Query: 205 RNRCRQEGSIIEGILLRRLLNF 140
           +NR R +GSI+EG     ++ F
Sbjct: 507 QNRSRPDGSIVEGYATEEVIEF 528



 Score = 70.9 bits (172), Expect(2) = 9e-34
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = -1

Query: 167 YSVEETIEFCTEYLAAVDPVGIPKSRHEGRLEGHGTLGHKMISPSAEICERAH 9
           Y+ EE IEFC +Y+A V+P+G+P+SRHEGRLEG GT+G K I+   +   +AH
Sbjct: 520 YATEEVIEFCVDYMAQVEPIGVPRSRHEGRLEGIGTIGRKAITADMDAYAQAH 572


>gb|AAM01138.1|AC108884_20 Putative transposase [Oryza sativa Japonica Group]
           gi|31431901|gb|AAP53613.1| transposon protein, putative,
           CACTA, En/Spm sub-class [Oryza sativa Japonica Group]
          Length = 997

 Score = 98.2 bits (243), Expect(2) = 8e-33
 Identities = 44/82 (53%), Positives = 58/82 (70%)
 Frame = -2

Query: 385 LQNDIIVTLCEFEMYFTVALFDIMVHLVIHLVRDIKLCSPLYLWQMYPFERFVCTLKAYV 206
           LQ DI+ TLC  EM+F ++ FDIMVHL +H+V+  KLC P +L +M PFER++  LK+YV
Sbjct: 640 LQTDIVNTLCHLEMFFPLSFFDIMVHLPVHMVKQTKLCGPAFLREMCPFERYMGVLKSYV 699

Query: 205 RNRCRQEGSIIEGILLRRLLNF 140
           RNR + EGSIIEG      + F
Sbjct: 700 RNRAKPEGSIIEGYTTEEAIEF 721



 Score = 67.4 bits (163), Expect(2) = 8e-33
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -1

Query: 167 YSVEETIEFCTEYLAAVDPVGIPKSRHEGRLEGHGTLGHKMISPSAEICERAHLV 3
           Y+ EE IEFC  Y++  DP+G+P SRHEGRL G GT+G K I P      +AH V
Sbjct: 713 YTTEEAIEFCVNYMSDADPIGVPASRHEGRLSGVGTIGRKRIRPDQTSYAQAHYV 767


>gb|AAV24780.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1675

 Score =  100 bits (250), Expect(2) = 1e-32
 Identities = 46/82 (56%), Positives = 59/82 (71%)
 Frame = -2

Query: 385 LQNDIIVTLCEFEMYFTVALFDIMVHLVIHLVRDIKLCSPLYLWQMYPFERFVCTLKAYV 206
           LQ DI+ TLC  EM+F ++ FDIMVHL IHLV+  KLC P +L +M+PFER++  LK+YV
Sbjct: 499 LQTDIVNTLCHLEMFFPLSFFDIMVHLPIHLVKQTKLCGPAFLREMWPFERYMGVLKSYV 558

Query: 205 RNRCRQEGSIIEGILLRRLLNF 140
           RNR + EGSIIEG      + F
Sbjct: 559 RNRAKPEGSIIEGYTTEEAIEF 580



 Score = 64.3 bits (155), Expect(2) = 1e-32
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = -1

Query: 167 YSVEETIEFCTEYLAAVDPVGIPKSRHEGRLEGHGTLGHKMISPSAEICERAH 9
           Y+ EE IEFC  Y++  +P+G+P SRHEGRL G GT+G K I P      +AH
Sbjct: 572 YTTEEAIEFCVNYMSDANPIGVPTSRHEGRLSGVGTIGRKRIRPDQASYTQAH 624


>gb|AAT58820.1| unknown protein [Oryza sativa Japonica Group]
          Length = 973

 Score = 99.8 bits (247), Expect(2) = 1e-32
 Identities = 44/82 (53%), Positives = 60/82 (73%)
 Frame = -2

Query: 385 LQNDIIVTLCEFEMYFTVALFDIMVHLVIHLVRDIKLCSPLYLWQMYPFERFVCTLKAYV 206
           LQ DI+ TLC  EM+F+++ FDIMVHL +HLV+  KLC P +L +M+PFER++  LK+YV
Sbjct: 623 LQTDIVNTLCHLEMFFSLSFFDIMVHLPVHLVKQTKLCGPAFLREMWPFERYMGVLKSYV 682

Query: 205 RNRCRQEGSIIEGILLRRLLNF 140
           RNR + +GSIIEG      + F
Sbjct: 683 RNRAKPKGSIIEGYTTEEAIEF 704



 Score = 65.5 bits (158), Expect(2) = 1e-32
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = -1

Query: 167 YSVEETIEFCTEYLAAVDPVGIPKSRHEGRLEGHGTLGHKMISPSAEICERAH 9
           Y+ EE IEFC  Y++  DP+G+P SRHEGRL G GT+G K I P      +AH
Sbjct: 696 YTTEEAIEFCVNYMSDPDPIGVPASRHEGRLSGVGTIGRKRIRPDQASYAQAH 748


>gb|ABA94078.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 834

 Score =  101 bits (251), Expect(2) = 1e-32
 Identities = 45/82 (54%), Positives = 60/82 (73%)
 Frame = -2

Query: 385 LQNDIIVTLCEFEMYFTVALFDIMVHLVIHLVRDIKLCSPLYLWQMYPFERFVCTLKAYV 206
           LQ DI+ TLC  EM+F ++ FDIMVHL +HLV+  KLC P +L +M+PFER++  LK+YV
Sbjct: 596 LQTDIVNTLCHLEMFFPLSFFDIMVHLPVHLVKQTKLCGPAFLREMWPFERYMGVLKSYV 655

Query: 205 RNRCRQEGSIIEGILLRRLLNF 140
           RNR + EGSIIEG   +  + F
Sbjct: 656 RNRAKPEGSIIEGYTTKEAIEF 677



 Score = 63.5 bits (153), Expect(2) = 1e-32
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 167 YSVEETIEFCTEYLAAVDPVGIPKSRHEGRLEGHGTLGHKMISPSAEICERAH 9
           Y+ +E IEFC  Y+   DP+G+P SRHEGRL G GT+G K I P      +AH
Sbjct: 669 YTTKEAIEFCVNYMFDADPIGVPASRHEGRLSGVGTIGRKRIRPDQASYAQAH 721


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