BLASTX nr result

ID: Cnidium21_contig00030821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030821
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              469   e-130
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   469   e-130
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   453   e-125
ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   449   e-124
ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding pro...   442   e-122

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  469 bits (1208), Expect = e-130
 Identities = 238/303 (78%), Positives = 268/303 (88%)
 Frame = +3

Query: 3    TTQLSVPLLIIAEDISTQVLETLVMNKVRGLLNVAVVKCPGMGEGKKALLQDIALMTGAD 182
            TTQLSVPLLIIAEDIS+QVLETLV+NK++G++NVAVVKCPG GEGKKALLQDIAL+TGAD
Sbjct: 281  TTQLSVPLLIIAEDISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGAD 340

Query: 183  YLAGDLGLSLEGATSDQLGIARKITITSDFTTIVADPSTKAELHARISQIKKDLTESDSS 362
            +L+GDLGL+L+ ATSDQLGIARK+TITS+ TT VADPSTK E+ ARI QIKKDL E+DSS
Sbjct: 341  FLSGDLGLTLDSATSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSS 400

Query: 363  YMSRKLSERIAKLSGGVAIIKVGAHTEMELEDRKLRIEDAKSATFAAMDEGIVPGGGATY 542
            Y+SRKLSERIAKLSGGVAIIKVGAHTE ELEDRKLRIEDAK+ATFAAMDEGIVPGGGATY
Sbjct: 401  YLSRKLSERIAKLSGGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATY 460

Query: 543  VHISEHIPNIKTFLVDPDEKIGADIVGMALLAPSKLIAANAGVDGDIVVENIRASKWQIG 722
            +H+ E IP IK  + DPDE+IGADIV  AL AP+K IA NAGVDG +V+E IR   W+ G
Sbjct: 461  IHLEEQIPIIKHSMEDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTG 520

Query: 723  YNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGIILTTQAVLVEKIKTPKPPIPLVPG 902
            Y+AM  RY+DLL  GVVDPCRVSRCALQNAVSVAGI+LTTQAVLVEK K PK  +P +PG
Sbjct: 521  YDAMTGRYQDLLNAGVVDPCRVSRCALQNAVSVAGIVLTTQAVLVEKTKPPKSAVPRLPG 580

Query: 903  ITP 911
            ITP
Sbjct: 581  ITP 583


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
            vinifera]
          Length = 602

 Score =  469 bits (1208), Expect = e-130
 Identities = 238/303 (78%), Positives = 268/303 (88%)
 Frame = +3

Query: 3    TTQLSVPLLIIAEDISTQVLETLVMNKVRGLLNVAVVKCPGMGEGKKALLQDIALMTGAD 182
            TTQLSVPLLIIAEDIS+QVLETLV+NK++G++NVAVVKCPG GEGKKALLQDIAL+TGAD
Sbjct: 300  TTQLSVPLLIIAEDISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTGAD 359

Query: 183  YLAGDLGLSLEGATSDQLGIARKITITSDFTTIVADPSTKAELHARISQIKKDLTESDSS 362
            +L+GDLGL+L+ ATSDQLGIARK+TITS+ TT VADPSTK E+ ARI QIKKDL E+DSS
Sbjct: 360  FLSGDLGLTLDSATSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETDSS 419

Query: 363  YMSRKLSERIAKLSGGVAIIKVGAHTEMELEDRKLRIEDAKSATFAAMDEGIVPGGGATY 542
            Y+SRKLSERIAKLSGGVAIIKVGAHTE ELEDRKLRIEDAK+ATFAAMDEGIVPGGGATY
Sbjct: 420  YLSRKLSERIAKLSGGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGATY 479

Query: 543  VHISEHIPNIKTFLVDPDEKIGADIVGMALLAPSKLIAANAGVDGDIVVENIRASKWQIG 722
            +H+ E IP IK  + DPDE+IGADIV  AL AP+K IA NAGVDG +V+E IR   W+ G
Sbjct: 480  IHLEEQIPIIKHSMEDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWRTG 539

Query: 723  YNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGIILTTQAVLVEKIKTPKPPIPLVPG 902
            Y+AM  RY+DLL  GVVDPCRVSRCALQNAVSVAGI+LTTQAVLVEK K PK  +P +PG
Sbjct: 540  YDAMTGRYQDLLNAGVVDPCRVSRCALQNAVSVAGIVLTTQAVLVEKTKPPKSAVPRLPG 599

Query: 903  ITP 911
            ITP
Sbjct: 600  ITP 602


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
            subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis]
          Length = 556

 Score =  453 bits (1165), Expect = e-125
 Identities = 229/303 (75%), Positives = 264/303 (87%)
 Frame = +3

Query: 3    TTQLSVPLLIIAEDISTQVLETLVMNKVRGLLNVAVVKCPGMGEGKKALLQDIALMTGAD 182
            T QLSVPLLI AED+S QVLETLV+NK++GLLNVAVVKCPG GEGKKALLQDIALMTGAD
Sbjct: 254  TMQLSVPLLIFAEDMSKQVLETLVVNKMQGLLNVAVVKCPGFGEGKKALLQDIALMTGAD 313

Query: 183  YLAGDLGLSLEGATSDQLGIARKITITSDFTTIVADPSTKAELHARISQIKKDLTESDSS 362
            +L+GD GL+L GATSDQLGIA+K+TITS+ TTIVAD STKAE+ ARI Q+KKDL E+D+ 
Sbjct: 314  FLSGDFGLTLMGATSDQLGIAQKVTITSNSTTIVADSSTKAEIQARILQMKKDLAETDNK 373

Query: 363  YMSRKLSERIAKLSGGVAIIKVGAHTEMELEDRKLRIEDAKSATFAAMDEGIVPGGGATY 542
            Y+SRKLSERIAKLSGGVA+IKVGAHTE ELEDRKLRIEDAK+AT+AAMDEGIVPGGGA Y
Sbjct: 374  YLSRKLSERIAKLSGGVALIKVGAHTETELEDRKLRIEDAKNATYAAMDEGIVPGGGAAY 433

Query: 543  VHISEHIPNIKTFLVDPDEKIGADIVGMALLAPSKLIAANAGVDGDIVVENIRASKWQIG 722
            VH+SE I  I+  + D +E+IGADIV  ALL P+K IA NAGVDG +VVE IR+S W+IG
Sbjct: 434  VHLSEQISTIQDSMEDENEQIGADIVAKALLVPAKTIATNAGVDGAVVVEKIRSSDWRIG 493

Query: 723  YNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGIILTTQAVLVEKIKTPKPPIPLVPG 902
            +NAM   YEDLL  GVVDPCRVSRCALQ+A S+AG++LTTQA+LVE+ K PKP +P VPG
Sbjct: 494  FNAMTGEYEDLLDAGVVDPCRVSRCALQSAASIAGLVLTTQAILVERTKKPKPAVPHVPG 553

Query: 903  ITP 911
            ITP
Sbjct: 554  ITP 556


>ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Cucumis
            sativus]
          Length = 587

 Score =  449 bits (1154), Expect = e-124
 Identities = 231/303 (76%), Positives = 263/303 (86%)
 Frame = +3

Query: 3    TTQLSVPLLIIAEDISTQVLETLVMNKVRGLLNVAVVKCPGMGEGKKALLQDIALMTGAD 182
            T QLS+PLLI AEDIS +VLETLV+NK++GL+NVAVVKCPG+GE KKALLQDIALMTGAD
Sbjct: 285  TVQLSLPLLIFAEDISIKVLETLVVNKIQGLVNVAVVKCPGVGERKKALLQDIALMTGAD 344

Query: 183  YLAGDLGLSLEGATSDQLGIARKITITSDFTTIVADPSTKAELHARISQIKKDLTESDSS 362
            +L+GDLGL LEGATSDQLGIARK+ ITS+ TTIVADPSTK E+ ARISQIKKDL E+D+ 
Sbjct: 345  FLSGDLGLGLEGATSDQLGIARKVVITSNSTTIVADPSTKDEIQARISQIKKDLVETDNP 404

Query: 363  YMSRKLSERIAKLSGGVAIIKVGAHTEMELEDRKLRIEDAKSATFAAMDEGIVPGGGATY 542
             +SRKLSERIAKLSGGVA+IKVGAHTE+ELEDRKLRIEDAK+A FAAM+EGIVPGGGATY
Sbjct: 405  NLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAVFAAMNEGIVPGGGATY 464

Query: 543  VHISEHIPNIKTFLVDPDEKIGADIVGMALLAPSKLIAANAGVDGDIVVENIRASKWQIG 722
            VH+ E +P IK  + D DE IGADIVG ALLAP+KLIA+NAG DG +VVE  RA  W+ G
Sbjct: 465  VHLYELLPTIKQSMEDQDELIGADIVGKALLAPAKLIASNAGDDGVVVVEKTRACDWRHG 524

Query: 723  YNAMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGIILTTQAVLVEKIKTPKPPIPLVPG 902
            YNAM ++YEDL   GVVDPC VSRCALQ A SV GI+LTTQAV+VEKIK PKP +P VPG
Sbjct: 525  YNAMTDKYEDLFNAGVVDPCLVSRCALQIAASVTGIVLTTQAVMVEKIKKPKPLVPHVPG 584

Query: 903  ITP 911
            I+P
Sbjct: 585  ISP 587


>ref|XP_003528549.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Glycine max]
          Length = 548

 Score =  442 bits (1138), Expect = e-122
 Identities = 225/301 (74%), Positives = 262/301 (87%)
 Frame = +3

Query: 9    QLSVPLLIIAEDISTQVLETLVMNKVRGLLNVAVVKCPGMGEGKKALLQDIALMTGADYL 188
            QLSVPLLIIAEDI+ QVLETLV+NK++GLL VAVVKCPG G  KKALLQDIALMTGAD+L
Sbjct: 248  QLSVPLLIIAEDITRQVLETLVVNKMQGLLRVAVVKCPGFGGAKKALLQDIALMTGADFL 307

Query: 189  AGDLGLSLEGATSDQLGIARKITITSDFTTIVADPSTKAELHARISQIKKDLTESDSSYM 368
            +GDLGL+L+GATSDQLG A K+TITS+ TTI+ADPS KAE+ ARISQIKKDL+E+D++ +
Sbjct: 308  SGDLGLTLDGATSDQLGTALKVTITSNATTIIADPSMKAEIQARISQIKKDLSETDNANL 367

Query: 369  SRKLSERIAKLSGGVAIIKVGAHTEMELEDRKLRIEDAKSATFAAMDEGIVPGGGATYVH 548
            SRKLSERIAKLSGG+A+IKVGAHTE+ELEDRKLRI+DAK+ATFAA+ EGIVPGGGATYVH
Sbjct: 368  SRKLSERIAKLSGGIAVIKVGAHTEVELEDRKLRIDDAKNATFAAISEGIVPGGGATYVH 427

Query: 549  ISEHIPNIKTFLVDPDEKIGADIVGMALLAPSKLIAANAGVDGDIVVENIRASKWQIGYN 728
            + + IP I   + D +E+IGADIV  ALL P+K IA NAGVDGDIVV+ IR   W+IGYN
Sbjct: 428  LLDLIPTIMNSMEDLEEQIGADIVAKALLEPAKSIATNAGVDGDIVVQKIRTHDWRIGYN 487

Query: 729  AMNNRYEDLLAVGVVDPCRVSRCALQNAVSVAGIILTTQAVLVEKIKTPKPPIPLVPGIT 908
            AM   YEDLL  GV DP RV+RCALQ+AVSVAG +LTTQA+LV+KIK  KPP+PLVPGIT
Sbjct: 488  AMTGTYEDLLNAGVADPSRVARCALQSAVSVAGAVLTTQAILVDKIKKTKPPVPLVPGIT 547

Query: 909  P 911
            P
Sbjct: 548  P 548


Top