BLASTX nr result

ID: Cnidium21_contig00030804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030804
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633884.1| PREDICTED: DNA mismatch repair protein Mlh1-...   208   4e-52
emb|CBI38068.3| unnamed protein product [Vitis vinifera]              208   4e-52
ref|XP_003522597.1| PREDICTED: DNA mismatch repair protein Mlh1-...   201   4e-50
ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48
ref|XP_003598062.1| DNA mismatch repair protein Mlh1 [Medicago t...   191   7e-47

>ref|XP_003633884.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Vitis vinifera]
          Length = 381

 Score =  208 bits (529), Expect = 4e-52
 Identities = 103/122 (84%), Positives = 115/122 (94%)
 Frame = -3

Query: 366 LFYNMTARRKTLQNSGDDYPKIVDLLSRFAIHHINVSFSCRKHGAPRADVHSVASSSKID 187
           LFYNMTARRKTLQNS DDYPKIVDLLSRFAIHHINV+FSCRKHGA RADVH+VA+SS++D
Sbjct: 180 LFYNMTARRKTLQNSADDYPKIVDLLSRFAIHHINVNFSCRKHGAARADVHTVATSSRLD 239

Query: 186 AIRSVYGVSVAQNLIAIEASDDDLSSSVFEMHGLISDSNYIARKITMVLFINDRLVECGA 7
           AIRSV+GVSVA+NL+ IEA+DDD+SSSVFEM G IS+SNYIA+K TMVLFINDRLVEC A
Sbjct: 240 AIRSVFGVSVARNLMKIEAADDDVSSSVFEMDGFISNSNYIAKKTTMVLFINDRLVECTA 299

Query: 6   LK 1
           LK
Sbjct: 300 LK 301


>emb|CBI38068.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  208 bits (529), Expect = 4e-52
 Identities = 103/122 (84%), Positives = 115/122 (94%)
 Frame = -3

Query: 366 LFYNMTARRKTLQNSGDDYPKIVDLLSRFAIHHINVSFSCRKHGAPRADVHSVASSSKID 187
           LFYNMTARRKTLQNS DDYPKIVDLLSRFAIHHINV+FSCRKHGA RADVH+VA+SS++D
Sbjct: 165 LFYNMTARRKTLQNSADDYPKIVDLLSRFAIHHINVNFSCRKHGAARADVHTVATSSRLD 224

Query: 186 AIRSVYGVSVAQNLIAIEASDDDLSSSVFEMHGLISDSNYIARKITMVLFINDRLVECGA 7
           AIRSV+GVSVA+NL+ IEA+DDD+SSSVFEM G IS+SNYIA+K TMVLFINDRLVEC A
Sbjct: 225 AIRSVFGVSVARNLMKIEAADDDVSSSVFEMDGFISNSNYIAKKTTMVLFINDRLVECTA 284

Query: 6   LK 1
           LK
Sbjct: 285 LK 286


>ref|XP_003522597.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Glycine max]
          Length = 727

 Score =  201 bits (512), Expect = 4e-50
 Identities = 100/122 (81%), Positives = 112/122 (91%)
 Frame = -3

Query: 366 LFYNMTARRKTLQNSGDDYPKIVDLLSRFAIHHINVSFSCRKHGAPRADVHSVASSSKID 187
           LFYNM ARRKTLQNS DDY KIVDL+SRFAIHHINVSFSCRKHGA RADVH+VA SS++D
Sbjct: 162 LFYNMAARRKTLQNSSDDYSKIVDLVSRFAIHHINVSFSCRKHGAVRADVHTVAMSSRLD 221

Query: 186 AIRSVYGVSVAQNLIAIEASDDDLSSSVFEMHGLISDSNYIARKITMVLFINDRLVECGA 7
           AI+SVYGVSVA+NLI IEASD+D S+SVFEMHG +S++NY A+KITMVLFINDRLVEC A
Sbjct: 222 AIKSVYGVSVARNLIEIEASDNDPSTSVFEMHGYMSNANYAAKKITMVLFINDRLVECSA 281

Query: 6   LK 1
           LK
Sbjct: 282 LK 283


>ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|222862840|gb|EEF00347.1|
           predicted protein [Populus trichocarpa]
          Length = 747

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/122 (80%), Positives = 106/122 (86%)
 Frame = -3

Query: 366 LFYNMTARRKTLQNSGDDYPKIVDLLSRFAIHHINVSFSCRKHGAPRADVHSVASSSKID 187
           LFYNM ARRKT QNS DDY KIVDLLSRFAIHHINVSFSCRKHGA RADVHSV +SS++D
Sbjct: 181 LFYNMIARRKTFQNSSDDYSKIVDLLSRFAIHHINVSFSCRKHGASRADVHSVTTSSRLD 240

Query: 186 AIRSVYGVSVAQNLIAIEASDDDLSSSVFEMHGLISDSNYIARKITMVLFINDRLVECGA 7
           +IRSVYGVSVA NL+ IE  D D SSSVF M GLIS+SNY+A+K TMVLFINDRLVEC A
Sbjct: 241 SIRSVYGVSVALNLMKIEVPDSDPSSSVFNMDGLISNSNYVAKKTTMVLFINDRLVECTA 300

Query: 6   LK 1
           LK
Sbjct: 301 LK 302


>ref|XP_003598062.1| DNA mismatch repair protein Mlh1 [Medicago truncatula]
           gi|355487110|gb|AES68313.1| DNA mismatch repair protein
           Mlh1 [Medicago truncatula]
          Length = 764

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/122 (75%), Positives = 109/122 (89%)
 Frame = -3

Query: 366 LFYNMTARRKTLQNSGDDYPKIVDLLSRFAIHHINVSFSCRKHGAPRADVHSVASSSKID 187
           LFYNM AR+KTLQNS DDY KIVD++SRFAIHH NVSFSCRKHGA +ADVH+VA+SS++D
Sbjct: 154 LFYNMAARKKTLQNSSDDYSKIVDVVSRFAIHHTNVSFSCRKHGAVKADVHTVATSSRLD 213

Query: 186 AIRSVYGVSVAQNLIAIEASDDDLSSSVFEMHGLISDSNYIARKITMVLFINDRLVECGA 7
           AIR+VYGVS A NLI ++ASD+D SSS+FEMHG +S++NY A+KITMVLFINDRLVE  A
Sbjct: 214 AIRTVYGVSAAHNLIEVQASDNDPSSSIFEMHGYVSNANYAAKKITMVLFINDRLVEWSA 273

Query: 6   LK 1
           LK
Sbjct: 274 LK 275


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