BLASTX nr result

ID: Cnidium21_contig00030787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030787
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD65629.1| hypothetical protein 23.t00046 [Brassica oleracea]      60   1e-07

>gb|ABD65629.1| hypothetical protein 23.t00046 [Brassica oleracea]
          Length = 147

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 20/143 (13%)
 Frame = +1

Query: 13  GLLLTKDRMIRSNMNVNTLCMLCNVQTETHEHLFSTCTYS---------------YIGGW 147
           G L T DRM   NMNV+T C+LC    ET +HLF  C YS               +   W
Sbjct: 3   GRLSTGDRMRGWNMNVDTSCVLCQEPLETADHLFFKCPYSTQIWEALMKGVMESRFTMEW 62

Query: 148 GDII-----ADNVDHIRRKFTYLYVAAAFHAIWLERNNRVDNSRTSTSALRLLGEIKARL 312
             II     + N   ++   +   + +  HAIW+ERN R  N   S S + L+  +   +
Sbjct: 63  ERIITFLRESSNWSKVKLFVSRYILQSTVHAIWMERNRRKHNELPSPSVV-LIKRLDKNM 121

Query: 313 REKLHSCPVFKKKKLARMLLFYY 381
           R +L        K+LA  + F++
Sbjct: 122 RNRLTILQRRGDKELAEGMTFWF 144


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