BLASTX nr result
ID: Cnidium21_contig00030754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00030754
(1901 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [C... 281 3e-73
ref|XP_002525131.1| bromodomain-containing protein, putative [Ri... 280 1e-72
ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [G... 276 2e-71
ref|NP_172113.1| global transcription factor group E4 [Arabidops... 250 1e-63
ref|XP_002889594.1| DNA-binding bromodomain-containing protein [... 247 9e-63
>ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription
factor GTE4-like [Cucumis sativus]
Length = 667
Score = 281 bits (720), Expect = 3e-73
Identities = 177/399 (44%), Positives = 222/399 (55%), Gaps = 31/399 (7%)
Frame = +1
Query: 271 ENRVTISLASKSKKEMGEYRRKLQGELDLVXXXXXXXXXXXXX-------------GMDV 411
EN+ +L SKSK+EM E RRKL+ +L + GMD
Sbjct: 171 ENQNNNNLGSKSKQEMRELRRKLESDLATIRDVLKRIEAKQGELSESGTFHVTTNEGMDK 230
Query: 412 GELDGGQVKKK----RVRSEPEVEDRPLNQLSVSVVENSQAGIGSVEKEKRTPKVNQFYR 579
D Q+ + RV EP RPLN+LSVSV+ENSQ VEKEKRTPK NQFYR
Sbjct: 231 VGGDKQQIHPEVASVRVPREPS---RPLNKLSVSVLENSQGVSDYVEKEKRTPKANQFYR 287
Query: 580 NSEFLLGKDKIPPVXXXXXXXXXXXXXXXXXXIPPVDQNSKGSGKKQNGDYPQVDXXXXX 759
NSEF+LGKDK+PP ++ +K + KK G
Sbjct: 288 NSEFILGKDKLPPAES--------------------NKKAKMNIKKPGGG---------- 317
Query: 760 XXXXXXXXXXXXXXXXXXSQFLKTCKGLLQRLMKHKNAWVFNVPVDVNALGLHDYFDIIK 939
S+F K+C LL++L+KHK WVF+ PVDV LGLHDY+ IIK
Sbjct: 318 ---------EIAHSFGTGSKFFKSCSSLLEKLIKHKYGWVFDAPVDVQGLGLHDYYTIIK 368
Query: 940 APMDLGTVKSRLDKNFYQSPMEFMVDVRLTFRNAMTYNPKGQDVYVMAEQLLQIFEDKWV 1119
PMDLGTVKSRL+KN+Y+SP EF DVRLTFRNAMTYNPKGQDVYVMA+QLL IFED+WV
Sbjct: 369 HPMDLGTVKSRLNKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVYVMADQLLSIFEDRWV 428
Query: 1120 VIEADYVQELKLVVERESRL----TKKPHTPEEPPVEALNAFELSTN----LVNLGHP-- 1269
+IEADY +E++ ++ + L ++K P PP++ E S + L + P
Sbjct: 429 IIEADYNREMRFGLDYGAALSTPTSRKARLPPPPPLDMKRILERSESTTYRLDSKNRPLS 488
Query: 1270 ----GRXXXXXXXXXRDPNKREMTYAEKQKLSSNLQSLP 1374
R +DP+KR+MTY EKQKLSSNLQ+LP
Sbjct: 489 ATPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSSNLQNLP 527
Score = 71.2 bits (173), Expect = 9e-10
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 1503 QHDDEIEVDIDSFDTETLWELDRFLINYKKYLSKHRKNSELANKEKPAVDRSDHSENLAP 1682
Q D+EIEVDIDS D ETLWELDRF+ NYKK LSK+++ +ELA + + D +S AP
Sbjct: 547 QDDEEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELALRAR--ADDEHNSTQKAP 604
Query: 1683 IV-DLVVETQRETEIESSPARLENQ 1754
+V ++ +T+ + SS ++ Q
Sbjct: 605 VVMEVPKKTKADENTVSSSVPVQGQ 629
>ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing
protein, putative [Ricinus communis]
Length = 742
Score = 280 bits (716), Expect = 1e-72
Identities = 177/409 (43%), Positives = 222/409 (54%), Gaps = 39/409 (9%)
Frame = +1
Query: 265 GEENRVTISLASKSKKEMGEYRRKLQGELDLVXXXXXXXXXXXXXGMDVGELDGGQVKK- 441
G ++V I+LASKSK+EM E RRKL+ ELD+V + V EL QV
Sbjct: 229 GLNDKVKINLASKSKQEMKELRRKLESELDMVRSLVKKIEAKEVQ-LGVSELSNLQVSLN 287
Query: 442 -------KRVRSE-----------------PEVEDRPLNQLSVSVVENSQAGIGSVEKEK 549
KRV SE + RPLNQLS+SV ENSQ + +VEKEK
Sbjct: 288 DRVYNGLKRVNSEVVSVGLSHDITTPIATPTPRQSRPLNQLSISVFENSQGAVENVEKEK 347
Query: 550 RTPKVNQFYRNSEFLLGKDKIPPVXXXXXXXXXXXXXXXXXXIPPVDQNSKGSGKKQNGD 729
RTPK NQFYRNSEFLL KDK PP ++ SK +GKKQ G
Sbjct: 348 RTPKANQFYRNSEFLLAKDKFPPAES--------------------NKKSKLNGKKQGGG 387
Query: 730 YPQVDXXXXXXXXXXXXXXXXXXXXXXXSQFLKTCKGLLQRLMKHKNAWVFNVPVDVNAL 909
S+ K C LL++LMKHK WVF PVDV L
Sbjct: 388 -------------------DMGFGFGAASKIFKNCSALLEKLMKHKYGWVFKSPVDVKGL 428
Query: 910 GLHDYFDIIKAPMDLGTVKSRLDKNFYQSPMEFMVDVRLTFRNAMTYNPKGQDVYVMAEQ 1089
GLHDYF IIK PMDLGTVK+RL+KN+Y+SP EF DVRLTF NAM YNPKGQDV+VMAE
Sbjct: 429 GLHDYFTIIKHPMDLGTVKTRLNKNWYKSPEEFAEDVRLTFHNAMRYNPKGQDVHVMAEI 488
Query: 1090 LLQIFEDKWVVIEADYVQELKLVVERESRL---TKKPHTPEEPPVEALNAFELSTNL--- 1251
LL++FED+WVVI++++ +E++ VV + T + PP++ + S ++
Sbjct: 489 LLKLFEDRWVVIKSEFDREMRFVVGCGIGIPTPTSRKAPLPPPPLDMRRILDRSDSMRYQ 548
Query: 1252 --------VNLGHPGRXXXXXXXXXRDPNKREMTYAEKQKLSSNLQSLP 1374
++ GR +DP+KR+MTY EKQKLS+NLQSLP
Sbjct: 549 PIDPRSKPISTTPSGRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLP 597
Score = 81.6 bits (200), Expect = 7e-13
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Frame = +3
Query: 1503 QHDDEIEVDIDSFDTETLWELDRFLINYKKYLSKHRKNSELANKEKPAVDRSDHSENLAP 1682
QHDDEIEVDIDS D ETLWELDRF+ NYKK LSK+++ +ELA++ + +R+ ++L
Sbjct: 617 QHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELASQARAEAERNVQEKSLQT 676
Query: 1683 IVDLV-----VETQRETEIESSPARLENQ 1754
+V +T SSP ++ENQ
Sbjct: 677 PAAVVAPPQGTKTDERNVSTSSPVQVENQ 705
>ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 276 bits (705), Expect = 2e-71
Identities = 174/395 (44%), Positives = 221/395 (55%), Gaps = 28/395 (7%)
Frame = +1
Query: 274 NRVTISLASKSKKEMGEYRRKLQGELDLVXXXXXXXXXXXXXGMDVGE----LDGG---- 429
+R+ I+LASKSK++M E R KL+ EL +V G +D G
Sbjct: 373 DRIKINLASKSKQQMRELRWKLERELGIVRCLVNRIEVKQRPVGGYGNSNVLIDSGINNV 432
Query: 430 --------QVKKKRVRSEPEVEDRPLNQLSVSVVENSQAGIGSVEKEKRTPKVNQFYRNS 585
+V V EP RPL+QLS+S++ENSQ +VEKEKRTPK NQFYRNS
Sbjct: 433 GGAKRAHSEVASAGVPREP-ASTRPLHQLSLSMLENSQGICETVEKEKRTPKANQFYRNS 491
Query: 586 EFLLGKDKIPPVXXXXXXXXXXXXXXXXXXIPPVDQNSKGSGKKQNGDYPQVDXXXXXXX 765
EFLL KDK PP ++ SK + KKQ G
Sbjct: 492 EFLLAKDKFPPAES--------------------NKKSKLNWKKQGGG------------ 519
Query: 766 XXXXXXXXXXXXXXXXSQFLKTCKGLLQRLMKHKNAWVFNVPVDVNALGLHDYFDIIKAP 945
S+F K+C LL++LMKHK+ WVFN PVDV ALGLHDYF II P
Sbjct: 520 -------EMGHGFGMGSKFFKSCSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHP 572
Query: 946 MDLGTVKSRLDKNFYQSPMEFMVDVRLTFRNAMTYNPKGQDVYVMAEQLLQIFEDKWVVI 1125
MDLGTVKSRL+KN+Y+SP EF DVRLTFRNAMTYNP GQDV++MAEQL +IFED+W +I
Sbjct: 573 MDLGTVKSRLNKNWYKSPKEFAEDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAII 632
Query: 1126 EADYVQELK------LVVERESRLTKKPHTPEEPPVE---ALNAFELST---NLVNLGHP 1269
E+DY +E++ V S L+++ PP++ LN E T L+++
Sbjct: 633 ESDYNREMRYGFDYGAVAPALSPLSRRVSAFTPPPLDMRRILNRSESMTQTPRLMSITPS 692
Query: 1270 GRXXXXXXXXXRDPNKREMTYAEKQKLSSNLQSLP 1374
R +DP+KR+MT+ EKQKLS+NLQSLP
Sbjct: 693 SRTPAPKKPKAKDPHKRDMTFEEKQKLSTNLQSLP 727
Score = 75.1 bits (183), Expect = 6e-11
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +3
Query: 1503 QHDDEIEVDIDSFDTETLWELDRFLINYKKYLSKHRKNSELANKEKPAVDRSDHSENLAP 1682
QHDDEIEVDIDS D ETLWELDRF+ NYKK LSK+++ +ELA A+ ++ ++ AP
Sbjct: 747 QHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAQARAEALQQNAIQKSQAP 806
Query: 1683 IVDLVVETQRET 1718
+ E +ET
Sbjct: 807 ---AMAEIPKET 815
>ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor
group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription
factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName:
Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity
to a Ring3 protein from Homo sapiens gi|133157 and
contains a bromodomain PF|00439. EST gb|F14211 comes from
this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor
group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor
group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor
group E4 [Arabidopsis thaliana]
Length = 766
Score = 250 bits (638), Expect = 1e-63
Identities = 163/403 (40%), Positives = 212/403 (52%), Gaps = 35/403 (8%)
Frame = +1
Query: 271 ENRVTISLASKSKKEMGEYRRKLQGELDLVXXXXXXXXXXXXX-------------GMDV 411
+ R+ I +AS +K++ E R+KL+ +L++V G++
Sbjct: 265 DGRIRIHVASTTKQQKEEIRKKLEDQLNVVRGMVKKIEDKEGEIGAYNDSRVLINTGINN 324
Query: 412 GELDGGQV----KKKRVRSEPEVEDRPLNQLSVSVVENSQAGIGSVEKEKRTPKVNQFYR 579
G GG++ + E RP+NQLS+SV+EN+Q VEKEKRTPK NQFYR
Sbjct: 325 G---GGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEKEKRTPKANQFYR 381
Query: 580 NSEFLLGKDKIPPVXXXXXXXXXXXXXXXXXXIPPVDQNSKGSGKKQNGDYPQVDXXXXX 759
NSEFLLG DK+PP ++ SK S KKQ GD
Sbjct: 382 NSEFLLG-DKLPPAES--------------------NKKSKSSSKKQGGDVGH------- 413
Query: 760 XXXXXXXXXXXXXXXXXXSQFLKTCKGLLQRLMKHKNAWVFNVPVDVNALGLHDYFDIIK 939
++ K C LL+RLMKHK+ WVFN PVDV LGL DY+ II+
Sbjct: 414 -------------GFGAGTKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIE 460
Query: 940 APMDLGTVKSRLDKNFYQSPMEFMVDVRLTFRNAMTYNPKGQDVYVMAEQLLQIFEDKWV 1119
PMDLGT+KS L KN Y+SP EF DVRLTF NAMTYNP+GQDV++MA LLQIFE++W
Sbjct: 461 HPMDLGTIKSALMKNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWA 520
Query: 1120 VIEADYVQELKLVVERESRL------TKKPHTPEEPPVEALNAFELS--TNLVNLGHPGR 1275
VIEADY +E++ V E L ++ T PP+ N + + +N PGR
Sbjct: 521 VIEADYNREMRFVTGYEMNLPTPTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGR 580
Query: 1276 XXXXXXXXXR----------DPNKREMTYAEKQKLSSNLQSLP 1374
R +PNKR+MTY EKQKLS +LQ+LP
Sbjct: 581 TPTSATPSGRTPALKKPKANEPNKRDMTYEEKQKLSGHLQNLP 623
Score = 65.9 bits (159), Expect = 4e-08
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 1509 DDEIEVDIDSFDTETLWELDRFLINYKKYLSKHRKNSELANKEKPAVDRSDHSENLAP 1682
D+EIEVDIDS D ETLWELDRF+ NYKK LSK ++ +ELA + + +R+ + +AP
Sbjct: 645 DEEIEVDIDSVDPETLWELDRFVTNYKKGLSKKKRKAELAIQARAEAERNS-QQQMAP 701
>ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297335436|gb|EFH65853.1| DNA-binding
bromodomain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 767
Score = 247 bits (630), Expect = 9e-63
Identities = 160/403 (39%), Positives = 208/403 (51%), Gaps = 35/403 (8%)
Frame = +1
Query: 271 ENRVTISLASKSKKEMGEYRRKLQGELDLVXXXXXXXXXXXXX-------------GMDV 411
+ R+ I +AS +K++ E R+KL+ +L +V G++
Sbjct: 265 DGRIRIHVASTTKQQKEEIRKKLEDQLSVVRGMVKKIEDKEGEIGAYNDSRVLINTGINN 324
Query: 412 GELDGGQV----KKKRVRSEPEVEDRPLNQLSVSVVENSQAGIGSVEKEKRTPKVNQFYR 579
G GG++ + E RP+NQLS+SV+EN+Q VEKEKRTPK NQFYR
Sbjct: 325 G---GGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEKEKRTPKANQFYR 381
Query: 580 NSEFLLGKDKIPPVXXXXXXXXXXXXXXXXXXIPPVDQNSKGSGKKQNGDYPQVDXXXXX 759
SEFLLG DK+PP ++ SK S KKQ GD
Sbjct: 382 TSEFLLG-DKLPPAES--------------------NKKSKSSSKKQGGDVGH------- 413
Query: 760 XXXXXXXXXXXXXXXXXXSQFLKTCKGLLQRLMKHKNAWVFNVPVDVNALGLHDYFDIIK 939
S+ K C LL+RLMKHK+ WVFN PVDV LGL DY+ II+
Sbjct: 414 -------------GFGAGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIE 460
Query: 940 APMDLGTVKSRLDKNFYQSPMEFMVDVRLTFRNAMTYNPKGQDVYVMAEQLLQIFEDKWV 1119
PMDLGT+KS L KN Y+SP EF DVRLTF NAMTYNP+GQDV++MA LLQIFE++W
Sbjct: 461 HPMDLGTIKSALMKNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWA 520
Query: 1120 VIEADYVQELKLVVERESRL------TKKPHTPEEPPVEALNAFELS------------T 1245
VIEADY +E++ V E L ++ T PP+ N + + +
Sbjct: 521 VIEADYNREMRFVTGYEMNLPTHTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGS 580
Query: 1246 NLVNLGHPGRXXXXXXXXXRDPNKREMTYAEKQKLSSNLQSLP 1374
+ GR +PNKR+MTY EKQKLS +LQ+LP
Sbjct: 581 TPTSATPSGRTPALKKPKANEPNKRDMTYEEKQKLSGHLQNLP 623
Score = 65.9 bits (159), Expect = 4e-08
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 1509 DDEIEVDIDSFDTETLWELDRFLINYKKYLSKHRKNSELANKEKPAVDRSDHSENLAP 1682
D+EIEVDIDS D ETLWELDRF+ NYKK LSK ++ +ELA + + +R+ + +AP
Sbjct: 645 DEEIEVDIDSVDPETLWELDRFVTNYKKGLSKKKRKAELAIQARAEAERNS-QQQMAP 701