BLASTX nr result

ID: Cnidium21_contig00030744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030744
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882994.1| binding protein [Arabidopsis lyrata subsp. l...    55   8e-06
ref|NP_566540.1| VHS domain-containing protein [Arabidopsis thal...    55   8e-06

>ref|XP_002882994.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328834|gb|EFH59253.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 694

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 496 NGSKKEDTRAFDFISDHLAAARDTKRV 416
           NGSKKEDTRAFDFISDHLA+ RDTKRV
Sbjct: 667 NGSKKEDTRAFDFISDHLASTRDTKRV 693


>ref|NP_566540.1| VHS domain-containing protein [Arabidopsis thaliana]
           gi|75168952|sp|Q9C5H4.1|Y3627_ARATH RecName: Full=VHS
           domain-containing protein At3g16270
           gi|13430666|gb|AAK25955.1|AF360245_1 unknown protein
           [Arabidopsis thaliana] gi|14532838|gb|AAK64101.1|
           unknown protein [Arabidopsis thaliana]
           gi|332642271|gb|AEE75792.1| VHS domain-containing
           protein [Arabidopsis thaliana]
          Length = 690

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -3

Query: 496 NGSKKEDTRAFDFISDHLAAARDTKRV 416
           NGSKKEDTRAFDFISDHL +ARDTKRV
Sbjct: 663 NGSKKEDTRAFDFISDHLTSARDTKRV 689


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