BLASTX nr result

ID: Cnidium21_contig00030736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030736
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]          86   4e-15
ref|XP_003572886.1| PREDICTED: glutamate receptor 2.7-like [Brac...    84   9e-15
gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...    84   1e-14
ref|XP_002324493.1| glutamate-gated kainate-type ion channel rec...    82   5e-14
dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]          82   6e-14

>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
 Frame = -2

Query: 221 GHQESSFVKELLIKLNI---KYLGYSSIEAYDEALSLGCKNGGVDAIFDEIPYIKLFLHK 51
           G+QE SFVK++L  +     K+  YS++E Y +ALS G KNGGV AI DE+PY++LFL+K
Sbjct: 703 GYQEGSFVKDILKHMKFDSSKFRSYSTLEEYSDALSRGSKNGGVGAIVDELPYLRLFLNK 762

Query: 50  YGSKYKIVGPTYSSGG 3
           Y  KY +VGPTY + G
Sbjct: 763 YCRKYIMVGPTYKAAG 778


>ref|XP_003572886.1| PREDICTED: glutamate receptor 2.7-like [Brachypodium distachyon]
          Length = 1017

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
 Frame = -2

Query: 221 GHQESSFVKELLIKLNI---KYLGYSSIEAYDEALSLGCKNGGVDAIFDEIPYIKLFLHK 51
           GHQE +F+K LL+K+     +   YS++E Y +ALS G  NGGVDA+FDEIPY+KLFL +
Sbjct: 714 GHQEGTFIKPLLVKMGFDERRMKKYSTVEEYADALSRGSANGGVDAMFDEIPYLKLFLSQ 773

Query: 50  YGSKYKIVGPTYSSGG 3
           Y   Y +VGP Y + G
Sbjct: 774 YCDGYMMVGPVYKTDG 789


>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/76 (51%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
 Frame = -2

Query: 221 GHQESSFVKELLIKLNI---KYLGYSSIEAYDEALSLGCKNGGVDAIFDEIPYIKLFLHK 51
           G+Q+ SFV+++L ++     K+  YS++E Y++ALS G KNGGV AI DE+PY++LFL+K
Sbjct: 690 GYQKGSFVEDILKRMKFESSKFRNYSTLEDYNDALSRGSKNGGVGAIVDELPYLRLFLNK 749

Query: 50  YGSKYKIVGPTYSSGG 3
           Y  KY +VGPTY + G
Sbjct: 750 YCRKYVMVGPTYKTAG 765


>ref|XP_002324493.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865927|gb|EEF03058.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 853

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
 Frame = -2

Query: 221 GHQESSFVKELLIK-LNIK---YLGYSSIEAYDEALSLGCKNGGVDAIFDEIPYIKLFLH 54
           GHQ+ SFVK+ L+K LN        YS+ E Y +ALS G  NGGV AIF EIPYIKLFL 
Sbjct: 594 GHQKDSFVKDFLVKQLNFNDTMLREYSTPEEYHDALSRGTHNGGVAAIFAEIPYIKLFLA 653

Query: 53  KYGSKYKIVGPTYSSGG 3
           KY SK+++VGPTY + G
Sbjct: 654 KYCSKFQMVGPTYKTDG 670


>dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]
          Length = 983

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
 Frame = -2

Query: 221 GHQESSFVKELLIKLNI---KYLGYSSIEAYDEALSLGCKNGGVDAIFDEIPYIKLFLHK 51
           G+Q+ SFV+ +L  +     K+  YS++E Y++ALS G KNGGV AI DE+PY++LFL+K
Sbjct: 711 GYQKGSFVRGVLKSMKFDSTKFRSYSTLEEYNDALSKGSKNGGVGAIVDELPYLRLFLNK 770

Query: 50  YGSKYKIVGPTYSSGG 3
           Y  KY +VGPTY + G
Sbjct: 771 YCRKYIMVGPTYKTAG 786


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