BLASTX nr result

ID: Cnidium21_contig00030735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030735
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]          94   1e-17
ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucu...    91   7e-17
ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucu...    91   7e-17
dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]          90   2e-16
ref|XP_002324493.1| glutamate-gated kainate-type ion channel rec...    90   2e-16

>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 ILTVGQLRPS-ADIPPC------AGYQEGSFVKDMLTNWLKLNVTECHSYSTMEAYDKAL 126
           +LTV QL+PS  D+          GYQEGSFVKD+L + +K + ++  SYST+E Y  AL
Sbjct: 679 MLTVQQLQPSITDLNDLIKNGEYVGYQEGSFVKDILKH-MKFDSSKFRSYSTLEEYSDAL 737

Query: 125 SLGCKNGGVDAIFDEIPYVKLFLHKYGSKYKMAGATYSTGG 3
           S G KNGGV AI DE+PY++LFL+KY  KY M G TY   G
Sbjct: 738 SRGSKNGGVGAIVDELPYLRLFLNKYCRKYIMVGPTYKAAG 778


>ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucumis sativus]
          Length = 829

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/77 (58%), Positives = 54/77 (70%)
 Frame = -2

Query: 233 GYQEGSFVKDMLTNWLKLNVTECHSYSTMEAYDKALSLGCKNGGVDAIFDEIPYVKLFLH 54
           GYQEGSF K ML   LK N ++  SY+ +E + KALS G +NGGV AIFDEIPY+K+FL 
Sbjct: 612 GYQEGSFTKSMLIEQLKFNESKLKSYANVEEFHKALSKGSQNGGVAAIFDEIPYLKVFLT 671

Query: 53  KYGSKYKMAGATYSTGG 3
           KYGS +  AG  Y T G
Sbjct: 672 KYGSDFIRAGPIYRTDG 688


>ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
          Length = 859

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/77 (58%), Positives = 54/77 (70%)
 Frame = -2

Query: 233 GYQEGSFVKDMLTNWLKLNVTECHSYSTMEAYDKALSLGCKNGGVDAIFDEIPYVKLFLH 54
           GYQEGSF K ML   LK N ++  SY+ +E + KALS G +NGGV AIFDEIPY+K+FL 
Sbjct: 638 GYQEGSFTKSMLIEQLKFNESKLKSYANVEEFHKALSKGSQNGGVAAIFDEIPYLKVFLT 697

Query: 53  KYGSKYKMAGATYSTGG 3
           KYGS +  AG  Y T G
Sbjct: 698 KYGSDFIRAGPIYRTDG 714


>dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]
          Length = 962

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/101 (50%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 ILTVGQLRPSA-DIPPC------AGYQEGSFVKDMLTNWLKLNVTECHSYSTMEAYDKAL 126
           +LTV QL+P+  D+          GYQ+GSFVKD+LT  +K + ++  SY T+E YD AL
Sbjct: 677 MLTVQQLQPTVTDLNDLIKNGEYVGYQKGSFVKDVLTR-MKFDSSKLRSYRTLEEYDDAL 735

Query: 125 SLGCKNGGVDAIFDEIPYVKLFLHKYGSKYKMAGATYSTGG 3
           S G KNGGV AI DE+PY++LFL+K   KY M G TY   G
Sbjct: 736 SRGSKNGGVGAIVDELPYLRLFLNKNCRKYIMVGPTYKAAG 776


>ref|XP_002324493.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865927|gb|EEF03058.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 853

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 52/101 (51%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
 Frame = -2

Query: 284 ILTVGQLRPS-ADIPPC------AGYQEGSFVKDMLTNWLKLNVTECHSYSTMEAYDKAL 126
           ILTV +L+P+  D+          G+Q+ SFVKD L   L  N T    YST E Y  AL
Sbjct: 570 ILTVKRLQPTFVDVKEIRKNGYFVGHQKDSFVKDFLVKQLNFNDTMLREYSTPEEYHDAL 629

Query: 125 SLGCKNGGVDAIFDEIPYVKLFLHKYGSKYKMAGATYSTGG 3
           S G  NGGV AIF EIPY+KLFL KY SK++M G TY T G
Sbjct: 630 SRGTHNGGVAAIFAEIPYIKLFLAKYCSKFQMVGPTYKTDG 670


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