BLASTX nr result

ID: Cnidium21_contig00030723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030723
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534345.1| transcription factor, putative [Ricinus comm...   192   7e-47
ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like ...   184   2e-44
ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like ...   183   3e-44
ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like ...   183   3e-44

>ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
           gi|223525454|gb|EEF28039.1| transcription factor,
           putative [Ricinus communis]
          Length = 554

 Score =  192 bits (487), Expect = 7e-47
 Identities = 104/179 (58%), Positives = 125/179 (69%), Gaps = 13/179 (7%)
 Frame = -3

Query: 686 DSHSLAERVRREKISKRMKTLEDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 507
           DSHSLAERVRREKIS+RMK L+DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA
Sbjct: 359 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 418

Query: 506 TVNPRLDINLGNLLSKNTIQPSATIPHQSYPVDSSSSAYYGHHQSQQIPQVHK------- 348
           +VN RLDINL  L+SK+  Q +  +PH  +P+DSS+SA +G HQ QQ P +H        
Sbjct: 419 SVNTRLDINLDTLMSKDIFQTTNQLPHPIFPIDSSASAIFG-HQPQQNPALHSNISNGAL 477

Query: 347 ---TLEPIDAAFCRNLGMH---IDRHGEALSRFPSLSEDDLQSIVQMGLATNQTPHMKL 189
              +++P+D     NL MH   ++       +FP+  E+DLQSIVQMG      P   L
Sbjct: 478 THCSVDPLDTGLSHNLNMHLPPLEGFNHTPPQFPTFCEEDLQSIVQMGFTQIPVPEALL 536


>ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|222844799|gb|EEE82346.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  184 bits (467), Expect = 1e-44
 Identities = 104/197 (52%), Positives = 128/197 (64%), Gaps = 29/197 (14%)
 Frame = -3

Query: 686 DSHSLAERVRREKISKRMKTLEDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 507
           DSHSLAERVRREKIS+RMK L+DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA
Sbjct: 367 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 426

Query: 506 TVNPRLDINLGNLLSKNTIQPSATIPHQSYPVDSSSSAYYGHHQSQQIPQVHK------- 348
           +VN RLD N+  L+SK+  Q S  +PH  +P+DSS+ A    HQ QQ P +H        
Sbjct: 427 SVNTRLDFNMDTLISKDIFQSSQPLPHPIFPLDSSAPAAIFSHQQQQNPPLHSNISNGAV 486

Query: 347 ---TLEPID-AAFCRNLGMH---IDRHGEALSRFPSLSEDDLQSIVQMGL---------- 219
              +++P+D    C+ L      +D   +   ++P+  EDDLQ+IVQMG           
Sbjct: 487 THCSVDPLDTTGLCQTLNAQLPPLDGFTQNAHQYPTFCEDDLQTIVQMGYGQNPNLETFL 546

Query: 218 -----ATNQTPHMKLEL 183
                 +NQ  HMK+EL
Sbjct: 547 PQNFHGSNQVSHMKIEL 563


>ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 548

 Score =  184 bits (466), Expect = 2e-44
 Identities = 103/201 (51%), Positives = 133/201 (66%), Gaps = 33/201 (16%)
 Frame = -3

Query: 686 DSHSLAERVRREKISKRMKTLEDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 507
           DSHSLAERVRREKIS+RMK L+DLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA
Sbjct: 348 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 407

Query: 506 TVNPRLDINLGNLLSKNTIQPS---ATIPHQSYPVDSSSSAYYGHHQSQQIPQVHK---- 348
           +VN R+D+++ NL+SK+  Q +   AT+P+  +P+DSS+  +YGH   Q  P  H     
Sbjct: 408 SVNTRMDLSIENLISKDVFQSNNSLATLPNAVFPLDSSAQTFYGHQPQQNNPVAHNNIPN 467

Query: 347 ------TLEPIDAAFCRNLGMH---IDRHGEALSRFP-SLSEDDLQSIVQMGL------- 219
                 +++P+D + C+NL M    ++   +  S+FP +  EDDL +IVQMG        
Sbjct: 468 RSVTHCSVDPLDTSLCQNLAMQLPPLNVFNDGGSQFPLAFLEDDLHTIVQMGFGQAANRK 527

Query: 218 ---------ATNQTPHMKLEL 183
                     +N  P MK+EL
Sbjct: 528 TPIQSPSFNGSNNVPQMKVEL 548


>ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
          Length = 450

 Score =  183 bits (464), Expect = 3e-44
 Identities = 100/173 (57%), Positives = 126/173 (72%), Gaps = 6/173 (3%)
 Frame = -3

Query: 686 DSHSLAERVRREKISKRMKTLEDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 507
           DSHSLAERVRREKIS+RMK L+DLVPGCNKVTGKALMLDEIINYVQSLQ QVEFLSMKLA
Sbjct: 263 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLA 322

Query: 506 TVN-PRLDINLGNLL-SKNTIQPSATIPH-QSYPVDSSSSAYYGHHQSQQIPQVHKTLEP 336
           +VN  R+D N+ +L+ SK   Q   ++ H Q  P+DSS+S++YGH  S      H +++P
Sbjct: 323 SVNTTRVDFNVDSLISSKQMYQSGTSLTHPQISPIDSSASSFYGHQNSSLPTTSHCSVDP 382

Query: 335 IDAAFCRNLGMHIDRHGEAL---SRFPSLSEDDLQSIVQMGLATNQTPHMKLE 186
           ID+  C+NL + +      L   S++P+  ED+LQSIVQMG   NQT  + L+
Sbjct: 383 IDSVLCQNLPIQLPPLNSFLQNPSQYPNFGEDELQSIVQMGFVQNQTQEISLQ 435


>ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
          Length = 412

 Score =  183 bits (464), Expect = 3e-44
 Identities = 100/173 (57%), Positives = 126/173 (72%), Gaps = 6/173 (3%)
 Frame = -3

Query: 686 DSHSLAERVRREKISKRMKTLEDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLA 507
           DSHSLAERVRREKIS+RMK L+DLVPGCNKVTGKALMLDEIINYVQSLQ QVEFLSMKLA
Sbjct: 225 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLA 284

Query: 506 TVN-PRLDINLGNLL-SKNTIQPSATIPH-QSYPVDSSSSAYYGHHQSQQIPQVHKTLEP 336
           +VN  R+D N+ +L+ SK   Q   ++ H Q  P+DSS+S++YGH  S      H +++P
Sbjct: 285 SVNTTRVDFNVDSLISSKQMYQSGTSLTHPQISPIDSSTSSFYGHQNSSLPTTSHCSVDP 344

Query: 335 IDAAFCRNLGMHIDRHGEAL---SRFPSLSEDDLQSIVQMGLATNQTPHMKLE 186
           ID+  C+NL + +      L   S++P+  ED+LQSIVQMG   NQT  + L+
Sbjct: 345 IDSVLCQNLPIQLPPLNSFLQNPSQYPNFGEDELQSIVQMGFVQNQTQEISLQ 397


Top