BLASTX nr result

ID: Cnidium21_contig00030661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030661
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               62   5e-08
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               62   5e-08
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               62   5e-08
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               62   5e-08
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    59   3e-07

>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +3

Query: 6   VKG*RLLAMTLHNGRVRKLAQVRYVPELNRNLISLGKLVDLVYTVMMKNGCLEVTKRDLA 185
           + G   + + +H+G VRK+  VR+V  L +NL+S+G+L DL   +  ++G L+V K +L 
Sbjct: 329 IAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLV 388

Query: 186 ILKGWKDKRNLFMLEGDVLVRGEA 257
           ++K  K   NL+ML GD L   +A
Sbjct: 389 VMKAEKITSNLYMLLGDTLQEADA 412


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +3

Query: 6   VKG*RLLAMTLHNGRVRKLAQVRYVPELNRNLISLGKLVDLVYTVMMKNGCLEVTKRDLA 185
           + G   + + +H+G VRK+  VR+V  L +NL+S+G+L DL   +  ++G L+V K +L 
Sbjct: 329 IAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLV 388

Query: 186 ILKGWKDKRNLFMLEGDVLVRGEA 257
           ++K  K   NL+ML GD L   +A
Sbjct: 389 VMKAEKITSNLYMLLGDTLQEADA 412


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +3

Query: 6   VKG*RLLAMTLHNGRVRKLAQVRYVPELNRNLISLGKLVDLVYTVMMKNGCLEVTKRDLA 185
           + G   + + +H+G VRK+  VR+V  L +NL+S+G+L DL   +  ++G L+V K +L 
Sbjct: 329 IAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLV 388

Query: 186 ILKGWKDKRNLFMLEGDVLVRGEA 257
           ++K  K   NL+ML GD L   +A
Sbjct: 389 VMKAEKITSNLYMLLGDTLQEADA 412


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +3

Query: 6   VKG*RLLAMTLHNGRVRKLAQVRYVPELNRNLISLGKLVDLVYTVMMKNGCLEVTKRDLA 185
           + G   + + +H+G VRK+  VR+V  L +NL+S+G+L DL   +  ++G L+V K +L 
Sbjct: 329 IAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLV 388

Query: 186 ILKGWKDKRNLFMLEGDVLVRGEA 257
           ++K  K   NL+ML GD L   +A
Sbjct: 389 VMKAEKITSNLYMLLGDTLQEADA 412


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/75 (42%), Positives = 47/75 (62%)
 Frame = +3

Query: 6   VKG*RLLAMTLHNGRVRKLAQVRYVPELNRNLISLGKLVDLVYTVMMKNGCLEVTKRDLA 185
           V G   +A+ +H+G+ R L +VR+VP+L RNLISLG L    Y    KNG L ++K  + 
Sbjct: 216 VVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSGYNFKAKNGKLTISKXAMV 275

Query: 186 ILKGWKDKRNLFMLE 230
           ++KG K +  L +LE
Sbjct: 276 VMKGQK-RNGLHILE 289


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