BLASTX nr result

ID: Cnidium21_contig00030641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030641
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]    87   2e-15
emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]    84   2e-14
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]         83   2e-14
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...    80   1e-13
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     79   4e-13

>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
          Length = 127

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/84 (47%), Positives = 61/84 (72%)
 Frame = -3

Query: 301 FKIVLYDGNESFTLWQRRVKDILTQQKLARALKGKEGQPIKMSDEDWEDAESQCMSTIKL 122
           F +V +DG  +F LWQRRVKD+L QQ + +AL GK  QP  M++ DW+D E +  +TI+L
Sbjct: 9   FDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGK--QPEGMNNMDWKDLEVKVAATIRL 66

Query: 121 CIANNIINNVVDESTPKELWSKLE 50
           C+A++++ +V+DE +P  +W KLE
Sbjct: 67  CLADDVMYHVMDEESPTAIWLKLE 90


>emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]
          Length = 105

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/84 (45%), Positives = 60/84 (71%)
 Frame = -3

Query: 301 FKIVLYDGNESFTLWQRRVKDILTQQKLARALKGKEGQPIKMSDEDWEDAESQCMSTIKL 122
           F +V ++G+ +F LWQRRVKD+L QQ + +AL  K  QP  M D DW+D E++  +TI+L
Sbjct: 9   FDVVKFNGSGNFGLWQRRVKDLLVQQGMVKALYEK--QPEGMDDMDWKDLEAKVEATIRL 66

Query: 121 CIANNIINNVVDESTPKELWSKLE 50
           C+ ++++ +V+DE +P  +W KLE
Sbjct: 67  CLVDDVMYHVMDEESPTTIWLKLE 90


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/84 (45%), Positives = 62/84 (73%)
 Frame = -3

Query: 301 FKIVLYDGNESFTLWQRRVKDILTQQKLARALKGKEGQPIKMSDEDWEDAESQCMSTIKL 122
           F +V +DG  +F LWQ RVKD+L QQ++++ALKG +  P KM D+D E+ + Q  +TI+ 
Sbjct: 90  FDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVK--PAKMEDDDCEEMQLQAAATIRR 147

Query: 121 CIANNIINNVVDESTPKELWSKLE 50
           C+++ I+ +V++E++PK +W KLE
Sbjct: 148 CLSDQIMYHVMEETSPKIIWEKLE 171


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/83 (43%), Positives = 59/83 (71%)
 Frame = -3

Query: 301 FKIVLYDGNESFTLWQRRVKDILTQQKLARALKGKEGQPIKMSDEDWEDAESQCMSTIKL 122
           F++V +DG  +F LWQ R+KD+L QQ +++AL+  E  P KM    WE+ ++Q  +TI+L
Sbjct: 9   FEVVKFDGTGNFILWQMRLKDLLAQQGISKALE--ETMPEKMDAGKWEEMKAQAAATIRL 66

Query: 121 CIANNIINNVVDESTPKELWSKL 53
            ++++++  V+DE TPKE+W KL
Sbjct: 67  SLSDSVMYPVMDEKTPKEIWDKL 89


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/85 (40%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = -3

Query: 301 FKIVLYDGNES-FTLWQRRVKDILTQQKLARALKGKEGQPIKMSDEDWEDAESQCMSTIK 125
           +++  ++G++  F++WQRR+KD+L QQ L +AL GK  +P  M  EDWE+ + +  S I+
Sbjct: 6   YEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAASAIR 65

Query: 124 LCIANNIINNVVDESTPKELWSKLE 50
           L + ++++NN+VDE +   +W+KLE
Sbjct: 66  LHLTDDVVNNIVDEESACGIWTKLE 90


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