BLASTX nr result

ID: Cnidium21_contig00030624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030624
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   322   6e-86
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   312   5e-83
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              296   3e-78
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   296   3e-78
ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...   293   2e-77

>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  322 bits (824), Expect = 6e-86
 Identities = 156/233 (66%), Positives = 193/233 (82%)
 Frame = -3

Query: 700  EVNAHVNALRTLCKQKAVNSEEADFLVKKWVDKLLSKASKILETYVSNDLEANKDSRFLT 521
            EVNAHV ALRTLCK+KA++++EA+ LV KWV +LLSKAS+ILE Y++ D E NK   F T
Sbjct: 673  EVNAHVKALRTLCKRKALDADEAESLVIKWVQQLLSKASRILEKYITGDSETNKGDAFFT 732

Query: 520  PPTQSSMSHRTGAAMSELLSQAISAVYTIGSIVLIYPSVKTNAVVPMLHKIITSGRSGSD 341
            PP  ++   +  AA+S LLS+A++AVY+IG +V+I PS  T+ ++P+LH IITSG S   
Sbjct: 733  PPRSATRKGKRAAALSRLLSEAVTAVYSIGFLVIICPSADTSTIIPLLHTIITSGNSDPK 792

Query: 340  SDKKPRPAVSIKETAPALYFQAWLAMGKICLADEKLAKRYIPLFVEELEKSDSAAIRNSI 161
              K P P VS+K+TAP+LY QAWL MGKICLADE+LAKRYIPLFV+ELEKSDSAA+RN++
Sbjct: 793  LSKLPGPQVSLKQTAPSLYIQAWLTMGKICLADEELAKRYIPLFVQELEKSDSAALRNNL 852

Query: 160  VVVLTDFCVRYTALVDSYISKITKCLRDPCEVVRRQTFILLTRLLQRDYVKCR 2
            VV++ DFC+RYTALVD YISKITKCLRDPCE+VRRQTFILL+RLLQRDYVK R
Sbjct: 853  VVMMADFCIRYTALVDCYISKITKCLRDPCELVRRQTFILLSRLLQRDYVKWR 905


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score =  312 bits (799), Expect = 5e-83
 Identities = 154/233 (66%), Positives = 187/233 (80%)
 Frame = -3

Query: 700  EVNAHVNALRTLCKQKAVNSEEADFLVKKWVDKLLSKASKILETYVSNDLEANKDSRFLT 521
            EVNAHV AL+ LCK+KA++S EAD LV KW  ++LS+ASK+LE Y+S ++EAN  + F T
Sbjct: 713  EVNAHVKALKILCKRKALDSGEADALVMKWAKQVLSRASKMLEKYISGNVEANNINSFFT 772

Query: 520  PPTQSSMSHRTGAAMSELLSQAISAVYTIGSIVLIYPSVKTNAVVPMLHKIITSGRSGSD 341
            PP     + + GAAM  LLS+ ++A YTIGS+V++ PSV  ++VVP+LH IITSG S   
Sbjct: 773  PPRSQKSNGKRGAAMCRLLSEVVTAAYTIGSLVIVCPSVDVSSVVPVLHTIITSGNSDPK 832

Query: 340  SDKKPRPAVSIKETAPALYFQAWLAMGKICLADEKLAKRYIPLFVEELEKSDSAAIRNSI 161
              K P P VS+K+TAP+LY QAWL MGKICLAD KLAKRYIPLFV+ELEKSD AA+RN++
Sbjct: 833  LSKLPGPRVSLKQTAPSLYIQAWLTMGKICLADGKLAKRYIPLFVQELEKSDCAALRNNL 892

Query: 160  VVVLTDFCVRYTALVDSYISKITKCLRDPCEVVRRQTFILLTRLLQRDYVKCR 2
            VV + DFCVRYTALVD YISKITKCLRDPCE+VRRQTFILL+RLLQ DYVK R
Sbjct: 893  VVTMADFCVRYTALVDCYISKITKCLRDPCELVRRQTFILLSRLLQMDYVKWR 945


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  296 bits (757), Expect = 3e-78
 Identities = 152/233 (65%), Positives = 182/233 (78%)
 Frame = -3

Query: 700  EVNAHVNALRTLCKQKAVNSEEADFLVKKWVDKLLSKASKILETYVSNDLEANKDSRFLT 521
            EVNAHV ALRTLCK++ +N +EAD LV+K V KLLSKAS+IL+ Y+S   EAN DS F T
Sbjct: 713  EVNAHVKALRTLCKRQVLNPDEADDLVQKCVHKLLSKASQILDKYISEASEANIDSDFRT 772

Query: 520  PPTQSSMSHRTGAAMSELLSQAISAVYTIGSIVLIYPSVKTNAVVPMLHKIITSGRSGSD 341
            PP  +    RT   MS  LS+AI+AVYTIGS+V+I PS   +A++P+LH IITSG S + 
Sbjct: 773  PPGGARRKGRTALTMSRSLSRAITAVYTIGSLVIICPSANLDAIIPILHTIITSGSSDTK 832

Query: 340  SDKKPRPAVSIKETAPALYFQAWLAMGKICLADEKLAKRYIPLFVEELEKSDSAAIRNSI 161
             +K       +K+ AP+LY  AW+ MGKICLAD +LAKRYIPLFV+ELEKSD AA+RN+I
Sbjct: 833  LNKLQGNTFPLKQAAPSLYIHAWVTMGKICLADGELAKRYIPLFVQELEKSDCAALRNNI 892

Query: 160  VVVLTDFCVRYTALVDSYISKITKCLRDPCEVVRRQTFILLTRLLQRDYVKCR 2
            VV L DFCVRYTALVD Y+SKITKCLRD CE+VRRQTFILL+RLLQRDYVK R
Sbjct: 893  VVTLADFCVRYTALVDCYVSKITKCLRDSCELVRRQTFILLSRLLQRDYVKWR 945


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  296 bits (757), Expect = 3e-78
 Identities = 152/233 (65%), Positives = 182/233 (78%)
 Frame = -3

Query: 700  EVNAHVNALRTLCKQKAVNSEEADFLVKKWVDKLLSKASKILETYVSNDLEANKDSRFLT 521
            EVNAHV ALRTLCK++ +N +EAD LV+K V KLLSKAS+IL+ Y+S   EAN DS F T
Sbjct: 754  EVNAHVKALRTLCKRQVLNPDEADDLVQKCVHKLLSKASQILDKYISEASEANIDSDFRT 813

Query: 520  PPTQSSMSHRTGAAMSELLSQAISAVYTIGSIVLIYPSVKTNAVVPMLHKIITSGRSGSD 341
            PP  +    RT   MS  LS+AI+AVYTIGS+V+I PS   +A++P+LH IITSG S + 
Sbjct: 814  PPGGARRKGRTALTMSRSLSRAITAVYTIGSLVIICPSANLDAIIPILHTIITSGSSDTK 873

Query: 340  SDKKPRPAVSIKETAPALYFQAWLAMGKICLADEKLAKRYIPLFVEELEKSDSAAIRNSI 161
             +K       +K+ AP+LY  AW+ MGKICLAD +LAKRYIPLFV+ELEKSD AA+RN+I
Sbjct: 874  LNKLQGNTFPLKQAAPSLYIHAWVTMGKICLADGELAKRYIPLFVQELEKSDCAALRNNI 933

Query: 160  VVVLTDFCVRYTALVDSYISKITKCLRDPCEVVRRQTFILLTRLLQRDYVKCR 2
            VV L DFCVRYTALVD Y+SKITKCLRD CE+VRRQTFILL+RLLQRDYVK R
Sbjct: 934  VVTLADFCVRYTALVDCYVSKITKCLRDSCELVRRQTFILLSRLLQRDYVKWR 986


>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like,
            partial [Cucumis sativus]
          Length = 929

 Score =  293 bits (751), Expect = 2e-77
 Identities = 148/234 (63%), Positives = 179/234 (76%), Gaps = 1/234 (0%)
 Frame = -3

Query: 700  EVNAHVNALRTLCKQKAVNSEEADFLVKKWVDKLLSKASKILETYVSNDLEANKDSRFLT 521
            EVNAHV  L+TLCK+KA  S EAD L+ KWV++LLSKAS ILE Y+SN  EANKD  F T
Sbjct: 332  EVNAHVKTLKTLCKRKASQSTEADALILKWVNQLLSKASDILEKYISNHAEANKDVNFTT 391

Query: 520  PPTQS-SMSHRTGAAMSELLSQAISAVYTIGSIVLIYPSVKTNAVVPMLHKIITSGRSGS 344
            PP +S S   +  +A S+ LS+AI+A YTIGS++LI PS     +VP+LH IITS     
Sbjct: 392  PPPKSGSRMGKKASARSKSLSRAITAAYTIGSLILICPSADMTTIVPLLHTIITSENRDL 451

Query: 343  DSDKKPRPAVSIKETAPALYFQAWLAMGKICLADEKLAKRYIPLFVEELEKSDSAAIRNS 164
             S+K P    S+KETAP+LY QAWL MGKICL DEK AK YIPLFV+EL  SD +A+RN+
Sbjct: 452  KSNKLPIQTASLKETAPSLYIQAWLTMGKICLTDEKRAKSYIPLFVQELGNSDCSALRNN 511

Query: 163  IVVVLTDFCVRYTALVDSYISKITKCLRDPCEVVRRQTFILLTRLLQRDYVKCR 2
            +++ + DFCVRYTALVD Y++KITKCLRDPCE+VRR TFILL+RLLQRDYVK R
Sbjct: 512  LIITMADFCVRYTALVDCYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWR 565


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