BLASTX nr result

ID: Cnidium21_contig00030567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030567
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   124   1e-26
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   115   3e-24
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...   115   4e-24
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   115   4e-24

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/126 (56%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   AEARAGALERLKAIRRDGRRSDTN--QIKVADPIYDTVDEDEYESLVAKRRQEAEEFVVD 174
           A AR+ AL+RLKA+RR GRRSD    QIKV DPIYDTVDEDEY+ LVAKRR+E   F+VD
Sbjct: 19  ATARSDALQRLKALRRGGRRSDGVGFQIKVEDPIYDTVDEDEYDKLVAKRREEFRGFIVD 78

Query: 175 DDGLGYLDEGQEEDWSKACGPMSSDESDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG 354
           D+G GY DEGQEEDWS A  P SSDESDG                             MG
Sbjct: 79  DNGSGYGDEGQEEDWSLAGVPPSSDESDGEAERPKKKKTEKKDPPPKKPSPLSAAAAMMG 138

Query: 355 KQRLSN 372
           KQRLS+
Sbjct: 139 KQRLSS 144


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/126 (56%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   AEARAGALERLKAIRRDGRRSDTN--QIKVADPIYDTVDEDEYESLVAKRRQEAEEFVVD 174
           A AR+ AL+RLKA+RR GRRSD    QIKV DPIYDTVDEDEY+ LVAKRR+E   F+VD
Sbjct: 19  ATARSDALQRLKALRRGGRRSDGVGFQIKVEDPIYDTVDEDEYDKLVAKRREEFRGFIVD 78

Query: 175 DDGLGYLDEGQEEDWSKACGPMSSDESDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG 354
           D+G GY DEGQEEDWS A  P SSDESDG                             MG
Sbjct: 79  DNGSGYGDEGQEEDWSLAGVPPSSDESDGEAERPKKKKTEKKDPPPKKPSPLSAAAAMMG 138

Query: 355 KQRLSN 372
           KQRLS+
Sbjct: 139 KQRLSS 144


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 3/90 (3%)
 Frame = +1

Query: 1   AEARAGALERLKAIRRDGRRSDTN---QIKVADPIYDTVDEDEYESLVAKRRQEAEEFVV 171
           A ARA ALERLKA+R+ GRRS+      IK+  PI+DTV ED+Y+ LVA+RR EA+ F+V
Sbjct: 19  ATARASALERLKALRQGGRRSENGAGYDIKMETPIFDTVSEDDYDKLVAQRRLEAQGFIV 78

Query: 172 DDDGLGYLDEGQEEDWSKACGPMSSDESDG 261
           DDDGLGY DEG+EEDWS+A  P SSDESDG
Sbjct: 79  DDDGLGYGDEGEEEDWSQAGLPPSSDESDG 108


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = +1

Query: 1   AEARAGALERLKAIRRDGRRSDTN--QIKVADPIYDTVDEDEYESLVAKRRQEAEEFVVD 174
           A AR  ALERLKAIR  GRRS+    Q+K+ +PIYDT+ EDEY++LVAKRR+E   F+VD
Sbjct: 19  AAARLTALERLKAIRSGGRRSEAGGFQVKLENPIYDTIPEDEYDALVAKRREEVRGFIVD 78

Query: 175 DDGLGYLDEGQEEDWSKACGPMSSDESDG 261
           DDGLGY DEG+EEDWSKA G   SDESDG
Sbjct: 79  DDGLGYGDEGEEEDWSKA-GVCFSDESDG 106


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = +1

Query: 1   AEARAGALERLKAIRRDGRRSDTN--QIKVADPIYDTVDEDEYESLVAKRRQEAEEFVVD 174
           A AR  ALERLKAIR  GRRS+    Q+K+ +PIYDT+ EDEY++LVAKRR+E   F+VD
Sbjct: 19  AAARLTALERLKAIRSGGRRSEAGGFQVKLENPIYDTIPEDEYDALVAKRREEVRGFIVD 78

Query: 175 DDGLGYLDEGQEEDWSKACGPMSSDESDG 261
           DDGLGY DEG+EEDWSKA G   SDESDG
Sbjct: 79  DDGLGYGDEGEEEDWSKA-GVCFSDESDG 106


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