BLASTX nr result

ID: Cnidium21_contig00030561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030561
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein ...    87   5e-34
ref|XP_002509710.1| conserved hypothetical protein [Ricinus comm...    84   1e-30
ref|XP_002299562.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-30
ref|NP_001241593.1| uncharacterized protein LOC100779255 [Glycin...    79   2e-30
gb|ACU21223.1| unknown [Glycine max]                                   79   2e-30

>ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Vitis
           vinifera] gi|297742597|emb|CBI34746.3| unnamed protein
           product [Vitis vinifera]
          Length = 236

 Score = 87.4 bits (215), Expect(2) = 5e-34
 Identities = 41/57 (71%), Positives = 50/57 (87%)
 Frame = -2

Query: 414 SSSEDEDDIKRELADVTFEDLQKARCDGSHTVYQKPNSQKSTSRANKNRPMEVTSKK 244
           SSSE+E++I+RELADVTFE+LQKAR DGSH+VY+ P S+K   R NKNRPMEV+SKK
Sbjct: 17  SSSEEEEEIERELADVTFEELQKARSDGSHSVYRMPKSEKKGGRPNKNRPMEVSSKK 73



 Score = 82.0 bits (201), Expect(2) = 5e-34
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -3

Query: 137 KKPVGRFREVIQVPKKVARDPRFETLCGELDVDGFKKRYNFLYE 6
           KKPV RFRE IQVPK+V RDPRFE+LCG LD DGF+KRYNFLYE
Sbjct: 72  KKPVSRFRETIQVPKRVVRDPRFESLCGTLDADGFRKRYNFLYE 115


>ref|XP_002509710.1| conserved hypothetical protein [Ricinus communis]
           gi|223549609|gb|EEF51097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 84.3 bits (207), Expect(2) = 1e-30
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = -3

Query: 137 KKPVGRFREVIQVPKKVARDPRFETLCGELDVDGFKKRYNFLYE 6
           KKPV RFREV Q PKKV RDPRFE+LCG+LDVDGF+KRYNFLYE
Sbjct: 88  KKPVSRFREVFQAPKKVVRDPRFESLCGQLDVDGFRKRYNFLYE 131



 Score = 73.9 bits (180), Expect(2) = 1e-30
 Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
 Frame = -2

Query: 414 SSSEDEDD---IKRELADVTFEDLQKARCDGSHTVYQKPNSQKSTSRANKNRPMEVTSKK 244
           SS +DED+   I+RE+AD TFE+LQKAR +GS +V+QKP  +K   RANKNRPMEV+ KK
Sbjct: 30  SSLDDEDEESEIEREIADATFEELQKARSNGSISVHQKPKQEKKPGRANKNRPMEVSCKK 89


>ref|XP_002299562.1| predicted protein [Populus trichocarpa] gi|222846820|gb|EEE84367.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 79.7 bits (195), Expect(2) = 2e-30
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = -3

Query: 137 KKPVGRFREVIQVPKKVARDPRFETLCGELDVDGFKKRYNFLYE 6
           KKPV RFREV+QVPKKV RDPRFE+LCG LDV+GF+KRY+FL++
Sbjct: 80  KKPVSRFREVVQVPKKVVRDPRFESLCGNLDVEGFRKRYDFLFK 123



 Score = 78.2 bits (191), Expect(2) = 2e-30
 Identities = 37/57 (64%), Positives = 47/57 (82%)
 Frame = -2

Query: 414 SSSEDEDDIKRELADVTFEDLQKARCDGSHTVYQKPNSQKSTSRANKNRPMEVTSKK 244
           SS EDE +I+RELA+VTFEDLQKA+ +GS TV++KP+ +K   RANKNRP EV+ KK
Sbjct: 25  SSEEDESEIERELAEVTFEDLQKAKSNGSLTVFKKPDQEKKGGRANKNRPTEVSCKK 81


>ref|NP_001241593.1| uncharacterized protein LOC100779255 [Glycine max]
           gi|255639103|gb|ACU19851.1| unknown [Glycine max]
          Length = 251

 Score = 79.0 bits (193), Expect(2) = 2e-30
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 137 KKPVGRFREVIQVPKKVARDPRFETLCGELDVDGFKKRYNFLYE 6
           KKPV  FREVIQ PKKV RDPRFE+LCG+LD +GF+KRYNFLYE
Sbjct: 87  KKPVSGFREVIQAPKKVVRDPRFESLCGKLDPEGFRKRYNFLYE 130



 Score = 78.6 bits (192), Expect(2) = 2e-30
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = -2

Query: 414 SSSEDEDDIKRELADVTFEDLQKARCDGSHTVYQKPNSQKSTSRANKNRPMEVTSKK 244
           S  E+E++I++ELADVTFE+LQKAR +G+H  +QKP   K   RANKNRPME +SKK
Sbjct: 32  SEDEEEEEIEKELADVTFEELQKARSNGTHAFFQKPKEDKKLKRANKNRPMEASSKK 88


>gb|ACU21223.1| unknown [Glycine max]
          Length = 250

 Score = 79.0 bits (193), Expect(2) = 2e-30
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 137 KKPVGRFREVIQVPKKVARDPRFETLCGELDVDGFKKRYNFLYE 6
           KKPV  FREVIQ PKKV RDPRFE+LCG+LD +GF+KRYNFLYE
Sbjct: 86  KKPVSGFREVIQAPKKVVRDPRFESLCGKLDPEGFRKRYNFLYE 129



 Score = 78.6 bits (192), Expect(2) = 2e-30
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = -2

Query: 414 SSSEDEDDIKRELADVTFEDLQKARCDGSHTVYQKPNSQKSTSRANKNRPMEVTSKK 244
           S  E+E++I++ELADVTFE+LQKAR +G+H  +QKP   K   RANKNRPME +SKK
Sbjct: 31  SEDEEEEEIEKELADVTFEELQKARSNGTHAFFQKPKEDKKLKRANKNRPMEASSKK 87


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