BLASTX nr result

ID: Cnidium21_contig00030536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030536
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244...   100   9e-20
emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]   100   9e-20
ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262...    98   6e-19
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...    97   1e-18
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...    97   2e-18

>ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
          Length = 1076

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 311 EGLNEGFNGINDEGEMAKNLMKIYGPVSDCVQLLKNLRAIVSIPNLKDKYKIRSFCLQNA 132
           +GL E    I D G+      K +      +++L+ LR  + +PN  D Y+I+SFCLQNA
Sbjct: 563 KGLKEVIEKIGDAGKSVDRFCKFHKTRRKFLEILRCLRQAIEVPNTTDHYRIKSFCLQNA 622

Query: 131 TLIFCTASNSIKMHSYVKPPVEMLVIDEAAQLKECESTIPLQL 3
           TL+FCTAS+S K+    K P+E+LVIDEAAQLKECES IPLQ+
Sbjct: 623 TLLFCTASSSAKIPVGGK-PIELLVIDEAAQLKECESAIPLQI 664


>emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]
          Length = 1003

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 311 EGLNEGFNGINDEGEMAKNLMKIYGPVSDCVQLLKNLRAIVSIPNLKDKYKIRSFCLQNA 132
           +GL E    I D G+      K +      +++L+ LR  + +PN  D Y+I+SFCLQNA
Sbjct: 462 KGLKEVIEKIGDAGKSVDRFCKFHKTRRKFLEILRCLRQAIEVPNTTDHYRIKSFCLQNA 521

Query: 131 TLIFCTASNSIKMHSYVKPPVEMLVIDEAAQLKECESTIPLQL 3
           TL+FCTAS+S K+    K P+E+LVIDEAAQLKECES IPLQ+
Sbjct: 522 TLLFCTASSSAKIPVGGK-PIELLVIDEAAQLKECESAIPLQI 563


>ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262126 [Vitis vinifera]
          Length = 1095

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/103 (49%), Positives = 68/103 (66%)
 Frame = -1

Query: 311 EGLNEGFNGINDEGEMAKNLMKIYGPVSDCVQLLKNLRAIVSIPNLKDKYKIRSFCLQNA 132
           E L E  +   D G+ A  L ++Y    +C+Q LK L   +++PN     KI+ FCL+ A
Sbjct: 549 ERLKEVLHECEDVGKCADLLPELYSTREECLQSLKCLCKKITLPNFYTDDKIKKFCLEKA 608

Query: 131 TLIFCTASNSIKMHSYVKPPVEMLVIDEAAQLKECESTIPLQL 3
            L+FCTAS+S+K+      PVE+LVIDEAAQLKECESTIPLQ+
Sbjct: 609 CLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQI 651


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/119 (43%), Positives = 72/119 (60%)
 Frame = -1

Query: 359 LLRTIERVMKIGCPPFEGLNEGFNGINDEGEMAKNLMKIYGPVSDCVQLLKNLRAIVSIP 180
           LL +I  ++      F+ L E      D G+      K++    +C+Q+LK L   + +P
Sbjct: 542 LLESIATLLHSSTVSFKRLKENICEFEDVGKAVDQFSKLHRNRQECLQILKCLHQTLPVP 601

Query: 179 NLKDKYKIRSFCLQNATLIFCTASNSIKMHSYVKPPVEMLVIDEAAQLKECESTIPLQL 3
            +    +I++FCL NA+LIFCTAS+S K+H     P E+LVIDEAAQLKECES IPLQL
Sbjct: 602 TIFLYDEIKNFCLCNASLIFCTASSSAKLHMAGMKPFELLVIDEAAQLKECESAIPLQL 660


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = -1

Query: 254 LMKIYGPVSDCVQLLKNLRAIVSIPNLKDKYKIRSFCLQNATLIFCTASNSIKMHSYVKP 75
           L ++     DCV LL++L   +S+PN+ +KY+I  FCL NA+LIFCTAS+S ++ +    
Sbjct: 543 LGRLNNTTEDCVCLLRSLLKKISLPNITEKYEIEKFCLMNASLIFCTASSSTRLFTEGMT 602

Query: 74  PVEMLVIDEAAQLKECESTIPLQL 3
           P++ LVIDEAAQLKECES IPLQL
Sbjct: 603 PIKFLVIDEAAQLKECESAIPLQL 626


Top