BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030531
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein ...   284   4e-74
dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]        284   4e-74
ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyra...   281   3e-73
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   274   3e-71
sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligas...   272   1e-70

>ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana]
            gi|75301658|sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3
            ubiquitin-protein ligase RING1-like; AltName: Full=RING
            finger protein 1 gi|20465263|gb|AAM19951.1|
            AT3g19950/MPN9_19 [Arabidopsis thaliana]
            gi|23308365|gb|AAN18152.1| At3g19950/MPN9_19 [Arabidopsis
            thaliana] gi|332642790|gb|AEE76311.1| E3
            ubiquitin-protein ligase RING1-like protein [Arabidopsis
            thaliana]
          Length = 328

 Score =  284 bits (726), Expect = 4e-74
 Identities = 142/275 (51%), Positives = 178/275 (64%), Gaps = 10/275 (3%)
 Frame = -1

Query: 1257 ATAETTLQLFFCHQCNHNVTINLIPNVDPLCPTCYDGFLEEIDDPNPDL---------DP 1105
            A A    ++FFC+QCN  VTI++  + DP CP C  GFLEE +DPNP+          D 
Sbjct: 12   AAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDS 71

Query: 1104 FEPLANFLSTF-PIFFGDSRHPFENLGTPXXXXXXXXXXXXXXXXXXVNPGERPEFDPFA 928
            F P+A+  ST  P+ FG S      +                      NP +   FDPF 
Sbjct: 72   FFPMADPFSTLLPLIFGSSAAAPSGMD---FMSLFGPSMQPQARSTQQNP-QSDAFDPFT 127

Query: 927  FFQDYVGSLRAGGANIQFVFENHPSGGEGGEGLPVNLGDYFMGQGLEQLIQQLAENDPNR 748
            F Q+++ +LR+ G + +FV ENHPS  + G  +P N GDYF G GLEQLIQQLAENDPNR
Sbjct: 128  FLQNHLQTLRSSGTHFEFVIENHPS--DPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNR 185

Query: 747  YGTPPASKTAVEGLPDVVVDDKLLGSDLAQCAVCQDDFEKDMVVKQMPCKHVYHSECLLP 568
            YGTPPASK+A++ LP V V   +L S++ QCAVC D+FE    VKQMPCKHV+H +CLLP
Sbjct: 186  YGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLP 245

Query: 567  WLELHNSCPVCRYELPTDDPDYENQARGNAGSGGG 463
            WLELHNSCPVCR+ELPTDDPDYEN+++G+ GSG G
Sbjct: 246  WLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDG 280


>dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
          Length = 386

 Score =  284 bits (726), Expect = 4e-74
 Identities = 142/275 (51%), Positives = 178/275 (64%), Gaps = 10/275 (3%)
 Frame = -1

Query: 1257 ATAETTLQLFFCHQCNHNVTINLIPNVDPLCPTCYDGFLEEIDDPNPDL---------DP 1105
            A A    ++FFC+QCN  VTI++  + DP CP C  GFLEE +DPNP+          D 
Sbjct: 70   AAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDS 129

Query: 1104 FEPLANFLSTF-PIFFGDSRHPFENLGTPXXXXXXXXXXXXXXXXXXVNPGERPEFDPFA 928
            F P+A+  ST  P+ FG S      +                      NP +   FDPF 
Sbjct: 130  FFPMADPFSTLLPLIFGSSAAAPSGMD---FMSLFGPSMQPQARSTQQNP-QSDAFDPFT 185

Query: 927  FFQDYVGSLRAGGANIQFVFENHPSGGEGGEGLPVNLGDYFMGQGLEQLIQQLAENDPNR 748
            F Q+++ +LR+ G + +FV ENHPS  + G  +P N GDYF G GLEQLIQQLAENDPNR
Sbjct: 186  FLQNHLQTLRSSGTHFEFVIENHPS--DPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNR 243

Query: 747  YGTPPASKTAVEGLPDVVVDDKLLGSDLAQCAVCQDDFEKDMVVKQMPCKHVYHSECLLP 568
            YGTPPASK+A++ LP V V   +L S++ QCAVC D+FE    VKQMPCKHV+H +CLLP
Sbjct: 244  YGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLP 303

Query: 567  WLELHNSCPVCRYELPTDDPDYENQARGNAGSGGG 463
            WLELHNSCPVCR+ELPTDDPDYEN+++G+ GSG G
Sbjct: 304  WLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDG 338


>ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329053|gb|EFH59472.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  281 bits (719), Expect = 3e-73
 Identities = 141/275 (51%), Positives = 177/275 (64%), Gaps = 10/275 (3%)
 Frame = -1

Query: 1257 ATAETTLQLFFCHQCNHNVTINLIPNVDPLCPTCYDGFLEEIDDPNPD---------LDP 1105
            AT     ++FFC+QCN  VTI++  + DP CP C  GFLEE +DPNP+         +D 
Sbjct: 12   ATEPEVDKMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSVDS 71

Query: 1104 FEPLANFLSTF-PIFFGDSRHPFENLGTPXXXXXXXXXXXXXXXXXXVNPGERPEFDPFA 928
              P+A+  ST  P+ FG S      +                      NP +   FDPF 
Sbjct: 72   LFPMADPFSTLLPLLFGSSAASPSGIDL-MSSSFFAPSMQPQARSTQQNP-QSDAFDPFT 129

Query: 927  FFQDYVGSLRAGGANIQFVFENHPSGGEGGEGLPVNLGDYFMGQGLEQLIQQLAENDPNR 748
            F Q+++ +LR+ G ++QFV ENHPS  + G  +P N GDYF G GLEQLIQQLAENDPNR
Sbjct: 130  FLQNHLQNLRSSGTHVQFVIENHPS--DLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNR 187

Query: 747  YGTPPASKTAVEGLPDVVVDDKLLGSDLAQCAVCQDDFEKDMVVKQMPCKHVYHSECLLP 568
            YGTPPASK+A++GLP V V   +L S++ QCAVC D+FE    VKQMPCKHV+H +CLLP
Sbjct: 188  YGTPPASKSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLP 247

Query: 567  WLELHNSCPVCRYELPTDDPDYENQARGNAGSGGG 463
            WL+LHNSCPVCR+ELPTDDPDYEN+ +G   SG G
Sbjct: 248  WLQLHNSCPVCRFELPTDDPDYENRTQGIQASGDG 282


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
            unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  274 bits (701), Expect = 3e-71
 Identities = 144/269 (53%), Positives = 175/269 (65%), Gaps = 6/269 (2%)
 Frame = -1

Query: 1236 QLFFCHQCNHNVTINLIPNVDPLCPTCYDGFLEEIDDPNPDLDPFEP---LANFLSTFPI 1066
            QL+FC+QCN  VTI   P     CP C++GFLEE+D PNP  +PF+     A  L  F  
Sbjct: 10   QLYFCYQCNRTVTITP-PTTALSCPNCHEGFLEELDSPNPSPNPFDAGLGPALLLDDFAS 68

Query: 1065 FFGDSRHPFENLGTPXXXXXXXXXXXXXXXXXXVNPGERPEFDPFAFFQDYVGSLRAGGA 886
             FG   +P     T                       +   F+PF F Q+Y+ ++RAGGA
Sbjct: 69   IFG-GMNPTPRSSTTSTTATNSSSASPLFQ-------DPDGFNPFVFLQNYLQTMRAGGA 120

Query: 885  NIQFVFENHPSGG---EGGEGLPVNLGDYFMGQGLEQLIQQLAENDPNRYGTPPASKTAV 715
            NIQFV EN+P  G     G  +P NLGDYF+G GLEQLIQQLAENDPNRYGTPPA+K+AV
Sbjct: 121  NIQFVIENNPGMGGMDPTGFRVPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAV 180

Query: 714  EGLPDVVVDDKLLGSDLAQCAVCQDDFEKDMVVKQMPCKHVYHSECLLPWLELHNSCPVC 535
            E LPDV V ++L+ SD +QCAVC+D FE   V KQ+PCKH+YH +C++PWLELHNSCPVC
Sbjct: 181  ENLPDVKVTEELMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVC 240

Query: 534  RYELPTDDPDYENQARGNAGSGGGNEPSG 448
            RYELPTDD DYE Q +GN GS G N+  G
Sbjct: 241  RYELPTDDQDYE-QRKGN-GSNGVNQNVG 267


>sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
            finger protein 1 gi|298155591|gb|ADI58769.1| RING-type
            ubiquitin E3 ligase [Gossypium hirsutum]
          Length = 338

 Score =  272 bits (696), Expect = 1e-70
 Identities = 140/283 (49%), Positives = 172/283 (60%), Gaps = 17/283 (6%)
 Frame = -1

Query: 1254 TAETTLQLFFCHQCNHNVTINLIP-NVDPLCPTCYDGFLEEIDDPNPDLD---------- 1108
            T   T + FFC+QCN  V + + P + DP CP C +GFLEE D+PNP+            
Sbjct: 15   TVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNS 74

Query: 1107 -PFEPLA-----NFLSTFPIFFGDSRHPFENLGTPXXXXXXXXXXXXXXXXXXVNPGERP 946
             PF  L       F S  P+ F     P  +  T                      G+  
Sbjct: 75   IPFHDLFLTLSDPFASLLPLLF-----PSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPF 129

Query: 945  EFDPFAFFQDYVGSLRAGGANIQFVFENHPSGGEGGEGLPVNLGDYFMGQGLEQLIQQLA 766
             FDPF F Q+++  LR+ GA I+FV +N+PS  + G  LP N+GDYF+G GLEQLIQQLA
Sbjct: 130  AFDPFTFIQNHLNDLRSSGAQIEFVIQNNPS--DQGFRLPANIGDYFIGPGLEQLIQQLA 187

Query: 765  ENDPNRYGTPPASKTAVEGLPDVVVDDKLLGSDLAQCAVCQDDFEKDMVVKQMPCKHVYH 586
            ENDPNRYGTPPASK+A+E LP V +    L S+  QCAVC DDFE+    KQMPCKH+YH
Sbjct: 188  ENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYH 247

Query: 585  SECLLPWLELHNSCPVCRYELPTDDPDYENQARGNAGSGGGNE 457
             +CLLPWLELHNSCPVCR+ELPTDDPDYE + RG  G+ GGN+
Sbjct: 248  KDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGND 290