BLASTX nr result

ID: Cnidium21_contig00030501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030501
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63264.1| zinc finger protein-like [Arabidopsis thaliana]         59   9e-07
ref|NP_568920.1| Dof zinc finger protein DOF5.3 [Arabidopsis tha...    59   9e-07
ref|XP_002864673.1| Dof-type zinc finger domain-containing prote...    59   9e-07
dbj|BAA97501.1| Dof6 zinc finger protein-like [Arabidopsis thali...    59   9e-07
ref|XP_004163372.1| PREDICTED: dof zinc finger protein DOF5.3-li...    59   1e-06

>gb|AAM63264.1| zinc finger protein-like [Arabidopsis thaliana]
          Length = 239

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 26/49 (53%), Positives = 28/49 (57%)
 Frame = +3

Query: 3   YFCKSCRRYWTRGGTLRNVPVGGGXXXXXXXXXXXXXXXXIVPGLACHD 149
           YFCKSCRRYWT+GGTLRN+PVGGG                  P  A HD
Sbjct: 62  YFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHD 110


>ref|NP_568920.1| Dof zinc finger protein DOF5.3 [Arabidopsis thaliana]
           gi|55583930|sp|Q84TE9.1|DOF53_ARATH RecName: Full=Dof
           zinc finger protein DOF5.3; Short=AtDOF5.3
           gi|29028844|gb|AAO64801.1| At5g60200 [Arabidopsis
           thaliana] gi|110736341|dbj|BAF00140.1| zinc finger
           protein - like [Arabidopsis thaliana]
           gi|225879142|dbj|BAH30641.1| hypothetical protein
           [Arabidopsis thaliana] gi|332009909|gb|AED97292.1| Dof
           zinc finger protein DOF5.3 [Arabidopsis thaliana]
          Length = 257

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 26/49 (53%), Positives = 28/49 (57%)
 Frame = +3

Query: 3   YFCKSCRRYWTRGGTLRNVPVGGGXXXXXXXXXXXXXXXXIVPGLACHD 149
           YFCKSCRRYWT+GGTLRN+PVGGG                  P  A HD
Sbjct: 80  YFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHD 128


>ref|XP_002864673.1| Dof-type zinc finger domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310508|gb|EFH40932.1| Dof-type zinc
           finger domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 259

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 26/49 (53%), Positives = 28/49 (57%)
 Frame = +3

Query: 3   YFCKSCRRYWTRGGTLRNVPVGGGXXXXXXXXXXXXXXXXIVPGLACHD 149
           YFCKSCRRYWT+GGTLRN+PVGGG                  P  A HD
Sbjct: 82  YFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSVTRSLRTTPEPASHD 130


>dbj|BAA97501.1| Dof6 zinc finger protein-like [Arabidopsis thaliana]
          Length = 237

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 26/49 (53%), Positives = 28/49 (57%)
 Frame = +3

Query: 3   YFCKSCRRYWTRGGTLRNVPVGGGXXXXXXXXXXXXXXXXIVPGLACHD 149
           YFCKSCRRYWT+GGTLRN+PVGGG                  P  A HD
Sbjct: 60  YFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHD 108


>ref|XP_004163372.1| PREDICTED: dof zinc finger protein DOF5.3-like [Cucumis sativus]
          Length = 266

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +3

Query: 3   YFCKSCRRYWTRGGTLRNVPVGGG 74
           YFCKSCRRYWT+GGTLRNVPVGGG
Sbjct: 68  YFCKSCRRYWTKGGTLRNVPVGGG 91


Top