BLASTX nr result

ID: Cnidium21_contig00030438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030438
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33563.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...    80   2e-13
ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [...    78   9e-13
ref|XP_002302984.1| methionyl-trna formyltransferase [Populus tr...    77   1e-12
ref|NP_176825.1| methionyl-tRNA formyltransferase [Arabidopsis t...    76   3e-12

>emb|CBI33563.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 8/75 (10%)
 Frame = +3

Query: 117 RSNTMLASSLMLRRFYCCTSTSSVS--------PSIKKKQLVFLGSPQVSASVLEALFNA 272
           ++   + SSLMLRRF+   +TSS S        P  K+KQLVFLGSPQVSA+VL+ LFNA
Sbjct: 23  QNRKQMNSSLMLRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNA 82

Query: 273 SSAPDSLFQIAAVVT 317
           S+APDS+F++AA+VT
Sbjct: 83  STAPDSMFEVAAIVT 97


>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 8/68 (11%)
 Frame = +3

Query: 138 SSLMLRRFYCCTSTSSVS--------PSIKKKQLVFLGSPQVSASVLEALFNASSAPDSL 293
           SSLMLRRF+   +TSS S        P  K+KQLVFLGSPQVSA+VL+ LFNAS+APDS+
Sbjct: 3   SSLMLRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNASTAPDSM 62

Query: 294 FQIAAVVT 317
           F++AA+VT
Sbjct: 63  FEVAAIVT 70


>ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [Ricinus communis]
           gi|223532528|gb|EEF34317.1| methionyl-tRNA
           formyltransferase, putative [Ricinus communis]
          Length = 362

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 5/68 (7%)
 Frame = +3

Query: 129 MLASSLMLRRFYCCTSTS-----SVSPSIKKKQLVFLGSPQVSASVLEALFNASSAPDSL 293
           M +SSLMLRRF C  S S       S + KKK LVFLGSPQVS +VL+ALFNASS+P+S+
Sbjct: 1   MQSSSLMLRRFRCFNSASVAAVPCASSTSKKKPLVFLGSPQVSTTVLDALFNASSSPNSI 60

Query: 294 FQIAAVVT 317
           F++AA+VT
Sbjct: 61  FEVAAIVT 68


>ref|XP_002302984.1| methionyl-trna formyltransferase [Populus trichocarpa]
           gi|222844710|gb|EEE82257.1| methionyl-trna
           formyltransferase [Populus trichocarpa]
          Length = 356

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 5/62 (8%)
 Frame = +3

Query: 147 MLRRFYCCTSTSSV-----SPSIKKKQLVFLGSPQVSASVLEALFNASSAPDSLFQIAAV 311
           MLRRF+C  ST++      S S KKK LVFLGSPQV+A+VL+ALFNAS AP+SLF++AA+
Sbjct: 1   MLRRFFCFNSTTTAVAAASSTSSKKKPLVFLGSPQVAATVLDALFNASKAPNSLFEVAAI 60

Query: 312 VT 317
           VT
Sbjct: 61  VT 62


>ref|NP_176825.1| methionyl-tRNA formyltransferase [Arabidopsis thaliana]
           gi|12322271|gb|AAG51166.1|AC074025_16 formyl
           transferase, putative [Arabidopsis thaliana]
           gi|332196399|gb|AEE34520.1| methionyl-tRNA
           formyltransferase [Arabidopsis thaliana]
          Length = 355

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
 Frame = +3

Query: 144 LMLRRFYCCTSTSSVS---PSIKKKQLVFLGSPQVSASVLEALFNASSAPDSLFQIAAVV 314
           ++LRRF C  ++S+VS   PS KKK L+FLGSPQVS SVLEALFNAS+AP+S F++A +V
Sbjct: 1   MILRRFICYNASSTVSSIAPSPKKKPLIFLGSPQVSVSVLEALFNASNAPNSSFEVAGIV 60

Query: 315 T 317
           T
Sbjct: 61  T 61


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