BLASTX nr result
ID: Cnidium21_contig00030438
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00030438 (319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI33563.3| unnamed protein product [Vitis vinifera] 80 1e-13 ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-... 80 2e-13 ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [... 78 9e-13 ref|XP_002302984.1| methionyl-trna formyltransferase [Populus tr... 77 1e-12 ref|NP_176825.1| methionyl-tRNA formyltransferase [Arabidopsis t... 76 3e-12 >emb|CBI33563.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 80.5 bits (197), Expect = 1e-13 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 8/75 (10%) Frame = +3 Query: 117 RSNTMLASSLMLRRFYCCTSTSSVS--------PSIKKKQLVFLGSPQVSASVLEALFNA 272 ++ + SSLMLRRF+ +TSS S P K+KQLVFLGSPQVSA+VL+ LFNA Sbjct: 23 QNRKQMNSSLMLRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNA 82 Query: 273 SSAPDSLFQIAAVVT 317 S+APDS+F++AA+VT Sbjct: 83 STAPDSMFEVAAIVT 97 >ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera] Length = 365 Score = 80.1 bits (196), Expect = 2e-13 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 8/68 (11%) Frame = +3 Query: 138 SSLMLRRFYCCTSTSSVS--------PSIKKKQLVFLGSPQVSASVLEALFNASSAPDSL 293 SSLMLRRF+ +TSS S P K+KQLVFLGSPQVSA+VL+ LFNAS+APDS+ Sbjct: 3 SSLMLRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNASTAPDSM 62 Query: 294 FQIAAVVT 317 F++AA+VT Sbjct: 63 FEVAAIVT 70 >ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [Ricinus communis] gi|223532528|gb|EEF34317.1| methionyl-tRNA formyltransferase, putative [Ricinus communis] Length = 362 Score = 77.8 bits (190), Expect = 9e-13 Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 5/68 (7%) Frame = +3 Query: 129 MLASSLMLRRFYCCTSTS-----SVSPSIKKKQLVFLGSPQVSASVLEALFNASSAPDSL 293 M +SSLMLRRF C S S S + KKK LVFLGSPQVS +VL+ALFNASS+P+S+ Sbjct: 1 MQSSSLMLRRFRCFNSASVAAVPCASSTSKKKPLVFLGSPQVSTTVLDALFNASSSPNSI 60 Query: 294 FQIAAVVT 317 F++AA+VT Sbjct: 61 FEVAAIVT 68 >ref|XP_002302984.1| methionyl-trna formyltransferase [Populus trichocarpa] gi|222844710|gb|EEE82257.1| methionyl-trna formyltransferase [Populus trichocarpa] Length = 356 Score = 77.0 bits (188), Expect = 1e-12 Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 5/62 (8%) Frame = +3 Query: 147 MLRRFYCCTSTSSV-----SPSIKKKQLVFLGSPQVSASVLEALFNASSAPDSLFQIAAV 311 MLRRF+C ST++ S S KKK LVFLGSPQV+A+VL+ALFNAS AP+SLF++AA+ Sbjct: 1 MLRRFFCFNSTTTAVAAASSTSSKKKPLVFLGSPQVAATVLDALFNASKAPNSLFEVAAI 60 Query: 312 VT 317 VT Sbjct: 61 VT 62 >ref|NP_176825.1| methionyl-tRNA formyltransferase [Arabidopsis thaliana] gi|12322271|gb|AAG51166.1|AC074025_16 formyl transferase, putative [Arabidopsis thaliana] gi|332196399|gb|AEE34520.1| methionyl-tRNA formyltransferase [Arabidopsis thaliana] Length = 355 Score = 76.3 bits (186), Expect = 3e-12 Identities = 39/61 (63%), Positives = 50/61 (81%), Gaps = 3/61 (4%) Frame = +3 Query: 144 LMLRRFYCCTSTSSVS---PSIKKKQLVFLGSPQVSASVLEALFNASSAPDSLFQIAAVV 314 ++LRRF C ++S+VS PS KKK L+FLGSPQVS SVLEALFNAS+AP+S F++A +V Sbjct: 1 MILRRFICYNASSTVSSIAPSPKKKPLIFLGSPQVSVSVLEALFNASNAPNSSFEVAGIV 60 Query: 315 T 317 T Sbjct: 61 T 61