BLASTX nr result

ID: Cnidium21_contig00030427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030427
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   248   2e-63
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   238   3e-60
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   200   7e-49
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   159   1e-36
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...   152   2e-34

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  248 bits (634), Expect = 2e-63
 Identities = 114/187 (60%), Positives = 149/187 (79%)
 Frame = +1

Query: 634  GGSNWKHKKLDLPVFTGTNPDGWILRAERYFNFYDLSESNQLEAAVVSLDGDALLWYQWE 813
            GG +W+ KKLDLPVF+G NPDGWI+RAER+F FY L+E  ++EAAVVSLDG+ALLWYQWE
Sbjct: 93   GGGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQWE 152

Query: 814  HGRRPIHRWEELKGMLLHHFRPTSSGTLYEQWLNHHQVAGVIEYRRGFIELMAPLTGVPE 993
            + RRPIHRW E++ MLL  FR T+ G+L EQWL+H Q  GV+EYRR FIEL+APL G+PE
Sbjct: 153  NRRRPIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQEEGVVEYRRKFIELLAPLEGIPE 212

Query: 994  EIAKGQFINGLKAEIRAEVRLLGPRTLDHAMDLAVKVEDKLNGGMRRKGEAKGAGVTYSS 1173
             IA+ QF++ LK EI+ EVR++GP +LDHAM+LAV+VE+KLN   ++K E+K +  +  +
Sbjct: 213  SIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSAHN 272

Query: 1174 TLSYSPQ 1194
              SY P+
Sbjct: 273  PNSYIPK 279


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  238 bits (606), Expect = 3e-60
 Identities = 140/372 (37%), Positives = 208/372 (55%), Gaps = 18/372 (4%)
 Frame = +1

Query: 130  APPTNQQRIELLEQGFGDLRASMAEQIA----IASQEMQQKLMDHLTLTMDQTSQ----- 282
            APPT  QR++LLE    +L+ S+A QI+    +A +  +  + D ++  M++  +     
Sbjct: 2    APPTTNQRLDLLEAQMANLQNSIAAQISDSVGLAMEAAKITIADQISQRMEEAMKKSKED 61

Query: 283  ------RMEARISRSREHNDMIIQVMRDEQVKFQHEQLKFQEELRSTLTSCRPPDVTQQF 444
                  R+E RI R+RE+ + ++ V R +Q KFQ        E+ S L   +P       
Sbjct: 62   LDVANFRLEGRIERTRENLEGMLTVARADQNKFQ-------TEVSSALAKLQP------- 107

Query: 445  GGSTSEPPGRNKLNMLVSDLGESGRP--EGSIAGSSRVXXXXXXXXXXXXXXXEALVSNR 618
                 +   R +++    DL   GR    G  A   R                EA     
Sbjct: 108  --EKEKNGNRKEVSPHTVDLELEGREGLRGERAMDRRGENEVFDGGGIGGGRGEAW---S 162

Query: 619  KWNNSGGSNWKHKKLDLPVFTGTNPDGWILRAERYFNFYDLSESNQLEAAVVSLDGDALL 798
            + ++  G NW+HKKLD+P F  T+PDGWILR ER+F FY L+++ ++EAAVV+++GDAL 
Sbjct: 163  RGHSGPGGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALR 222

Query: 799  WYQWEHGRRPIHRWEELKGMLLHHFRPTSSGTLYEQWLNHHQVAGVIEYRRGFIELMAPL 978
            WYQWE+ RRP   WE +K  +L  FRP + G+L+EQWL+  Q A V EYRR F+E  APL
Sbjct: 223  WYQWENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPL 282

Query: 979  TGVPEEIAKGQFINGLKAEIRAEVRLLGPRTLDHAMDLAVKVEDKLN-GGMRRKGEAKGA 1155
             G+PEEI  G+FI+GL  E+++E+R+L P  LD AM+LA+K+E++    G RR G   G+
Sbjct: 283  DGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGS 342

Query: 1156 GVTYSSTLSYSP 1191
               Y+   + +P
Sbjct: 343  FSIYNRGPNSNP 354


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  200 bits (508), Expect = 7e-49
 Identities = 101/188 (53%), Positives = 123/188 (65%)
 Frame = +1

Query: 634  GGSNWKHKKLDLPVFTGTNPDGWILRAERYFNFYDLSESNQLEAAVVSLDGDALLWYQWE 813
            GG  WK K+LDLP+FTGTNPDGWILR ERYF FY L+   QLEAAVV+LDG+ALLW+QWE
Sbjct: 73   GGGGWKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWE 132

Query: 814  HGRRPIHRWEELKGMLLHHFRPTSSGTLYEQWLNHHQVAGVIEYRRGFIELMAPLTGVPE 993
            H  RPI  W E+K MLL  FR T+ G+L EQW+NHHQ   V EY+  FIELMAPL  +PE
Sbjct: 133  HRHRPITGWPEMKAMLLRQFRDTALGSLQEQWMNHHQEGSVKEYKSRFIELMAPLDNIPE 192

Query: 994  EIAKGQFINGLKAEIRAEVRLLGPRTLDHAMDLAVKVEDKLNGGMRRKGEAKGAGVTYSS 1173
             IA+ QFI+ LK EI+ E+R                +E+KLN    R+ E + +   YS 
Sbjct: 193  NIAQAQFISKLKEEIKNEMR----------------IEEKLNRRGGRRWEPRPSN-NYSP 235

Query: 1174 TLSYSPQS 1197
                +P S
Sbjct: 236  NTHTTPNS 243


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  159 bits (402), Expect = 1e-36
 Identities = 86/183 (46%), Positives = 110/183 (60%), Gaps = 1/183 (0%)
 Frame = +1

Query: 607  VSNRKWNNSGGSNWK-HKKLDLPVFTGTNPDGWILRAERYFNFYDLSESNQLEAAVVSLD 783
            +++ +    G   W+  +++++PVFTG NPDGWI RA+RYF  Y L+E  +L AA +SLD
Sbjct: 754  MASDEMRRGGNGEWRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLD 813

Query: 784  GDALLWYQWEHGRRPIHRWEELKGMLLHHFRPTSSGTLYEQWLNHHQVAGVIEYRRGFIE 963
            GDAL WYQW   R     WE LK  LL  FR T  G+L EQ+L   Q   V  Y R F  
Sbjct: 814  GDALSWYQWTDSREVFGSWENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEI 873

Query: 964  LMAPLTGVPEEIAKGQFINGLKAEIRAEVRLLGPRTLDHAMDLAVKVEDKLNGGMRRKGE 1143
            L  PL G+ EE+ +  F+NGL  EIRAE RLL P  L H M++A +VED+ N  MR   E
Sbjct: 874  LETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDR-NLAMRAARE 932

Query: 1144 AKG 1152
              G
Sbjct: 933  PNG 935


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
            gi|223527635|gb|EEF29747.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 462

 Score =  152 bits (384), Expect = 2e-34
 Identities = 79/176 (44%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
 Frame = +1

Query: 655  KKLDLPVFTGTNPDGWILRAERYFNFYDLSESNQLEAAVVSLDGDALLWYQWEHGRRPIH 834
            +KL LPVF G NPDGWI RAERYF+  ++   ++L+AA V L+GDAL W+QWE GRRP  
Sbjct: 106  RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDALAWFQWEEGRRPFR 165

Query: 835  RWEELKGMLLHHFRPTSSGTLYEQWLNHHQVAGVIEYRRGFIELMAPLTGVPEEIAKGQF 1014
             W + K  L+  FR T  GTL++Q L   Q   V E+RR F  + APL G+ E++ +  F
Sbjct: 166  SWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAF 225

Query: 1015 INGLKAEIRAEVRLLGPRTLDHAMDLAVKVEDKLN--GGMRRKGEAKGAGVTYSST 1176
            +NGL+ +++AE+R   P  LD  M +A K+E+KL   G   +  + + A  T S T
Sbjct: 226  VNGLRPDMQAELRQWSPFGLDKKMQVAQKIEEKLKALGQYNQTTQNRWANSTPSGT 281


Top