BLASTX nr result
ID: Cnidium21_contig00030406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00030406
(598 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi... 294 9e-78
emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera] 291 4e-77
ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2... 277 9e-73
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 273 1e-71
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat... 273 1e-71
>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 294 bits (752), Expect = 9e-78
Identities = 140/198 (70%), Positives = 162/198 (81%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
CARLAS GQ VHGKAV GVD+DLLVSSALVDMYSKCGE DAW VF + ++NVI+W
Sbjct: 332 CARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISW 391
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
NSMI+GYA NG D+ AL LYEEML +NLKPDN+TFVGVLSACMHAGL E+GQ YF SI K
Sbjct: 392 NSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISK 451
Query: 236 FHGMTPTLDHYACVINILGRSGSVDKAVALIEDMEHTPNSLIWSTLLSVCKMCSDIENGE 57
HGM PT DHY+C+IN+LGR+G +DKAV LI+ M PN LIWSTLLSVC++ D+ NGE
Sbjct: 452 IHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGE 511
Query: 56 IAAKHLFELDPFNAEPYV 3
+AA+HLFELDP NA PY+
Sbjct: 512 MAARHLFELDPHNAGPYI 529
Score = 91.7 bits (226), Expect = 9e-17
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
C++L G+ +HG+ V + + V +AL +MY+KCG + A +F + +KNV++W
Sbjct: 165 CSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSW 224
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
NSMI GY NG L+ EM L PD VT +LSA G ++ + F I++
Sbjct: 225 NSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKE 284
Query: 236 FHGMTPTLDHYACVINILGRSGSVDKAVALIEDM---EHTPNSLIWSTLLSVCKMCSDIE 66
+ T C N G + A+ L +M P++ S+++S C + +
Sbjct: 285 KDKVCWTTMMVGCAQN-----GKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLC 339
Query: 65 NGE 57
G+
Sbjct: 340 QGQ 342
>emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
Length = 420
Score = 291 bits (746), Expect = 4e-77
Identities = 139/198 (70%), Positives = 161/198 (81%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
CARLAS GQ VHGKAV GVD+DLLVSSALVDMYSKCGE DAW VF + ++NVI+W
Sbjct: 20 CARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISW 79
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
NSMI+GYA NG D+ AL LYEEML +NLKPDN+TFVGVLSACMHAGL E+GQ YF SI K
Sbjct: 80 NSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISK 139
Query: 236 FHGMTPTLDHYACVINILGRSGSVDKAVALIEDMEHTPNSLIWSTLLSVCKMCSDIENGE 57
HG PT DHY+C+IN+LGR+G +DKAV LI+ M PN LIWSTLLSVC++ D+ NGE
Sbjct: 140 IHGXNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGE 199
Query: 56 IAAKHLFELDPFNAEPYV 3
+AA+HLFELDP NA PY+
Sbjct: 200 MAARHLFELDPHNAGPYI 217
>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
predicted protein [Populus trichocarpa]
Length = 695
Score = 277 bits (709), Expect = 9e-73
Identities = 130/198 (65%), Positives = 161/198 (81%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
CA+LAS YHGQVVHGKA MGV++DLLVSSALVDMY KCG DAWT+F+ + ++NV++W
Sbjct: 332 CAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSW 391
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
NSMI GYA NG D+ AL LYE ML++NLKPD+VTFVGVLSAC+HAGL E+G+ YF S+
Sbjct: 392 NSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSD 451
Query: 236 FHGMTPTLDHYACVINILGRSGSVDKAVALIEDMEHTPNSLIWSTLLSVCKMCSDIENGE 57
HG+ PT DHYAC++N+ GRSG +DKAV LI M PNSLIW+T+LSVC M DI++GE
Sbjct: 452 QHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGE 511
Query: 56 IAAKHLFELDPFNAEPYV 3
+AA+ L EL+PFNA PY+
Sbjct: 512 MAARCLIELNPFNAVPYI 529
Score = 102 bits (255), Expect = 4e-20
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
C +L G+ +HG+ + + ++ V +AL D+Y++CGEI A +F + +NV+TW
Sbjct: 165 CTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTW 224
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
N MI GY N +DL+ EM NLKPD VT VL A + AG Y D RK
Sbjct: 225 NLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAG-------YIDEARK 277
Query: 236 FHGMTPTLDHYACVINILG--RSGSVDKAVALIEDM---EHTPNSLIWSTLLSVCKMCSD 72
G D I I+G ++G + A+ L +M P+ S+++S C +
Sbjct: 278 VFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLAS 337
Query: 71 IENGEI 54
+ +G++
Sbjct: 338 LYHGQV 343
Score = 61.2 bits (147), Expect = 1e-07
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Frame = -3
Query: 590 RLASFY--HGQVVHGKAVHMGV-DNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVIT 420
RL + Y G++ H + + + D +A++ +Y+K G + D +F +PS++ ++
Sbjct: 63 RLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVS 122
Query: 419 WNSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIR 240
+N++I G+A NG AL ++ M ++ LKP T V VL+AC +G++ I
Sbjct: 123 YNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI- 181
Query: 239 KFHGMTPTLDHYACVINIL----GRSGSVDKAVALIEDMEHTPNSLIWSTLLS 93
+ L V N L R G +D+A L + M N + W+ ++S
Sbjct: 182 ----IICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMV-IRNVVTWNLMIS 229
>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 273 bits (699), Expect = 1e-71
Identities = 125/198 (63%), Positives = 160/198 (80%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
CA+LAS +HGQ VHGK++ G++N+LLVSSAL+DMYSKCG I DA +VF +P++NV++W
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
N+MI+G A NG D AL+L+E MLQQ KPDNVTF+G+LSAC+H EQGQ YFDSI
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISN 451
Query: 236 FHGMTPTLDHYACVINILGRSGSVDKAVALIEDMEHTPNSLIWSTLLSVCKMCSDIENGE 57
HGMTPTLDHYAC++N+LGR+G +++AVALI++M H P+ LIWSTLLS+C DI N E
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAE 511
Query: 56 IAAKHLFELDPFNAEPYV 3
+AA+HLFELDP A PY+
Sbjct: 512 VAARHLFELDPTIAVPYI 529
Score = 87.0 bits (214), Expect = 2e-15
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 3/182 (1%)
Frame = -3
Query: 593 ARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITWN 414
A+L +G+ +HG + ++ + +AL DMY+KCGEI A +F + KN+++WN
Sbjct: 166 AQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWN 225
Query: 413 SMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRKF 234
MI GYA NG + L +M PD VT +++A G ++ +R F ++
Sbjct: 226 LMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE- 284
Query: 233 HGMTPTLDHYACVINILGRSGSVDKAVALIEDM--EH-TPNSLIWSTLLSVCKMCSDIEN 63
+ + ++ ++G + A+ L +M EH P+S S+++S C + + +
Sbjct: 285 ----KDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH 340
Query: 62 GE 57
G+
Sbjct: 341 GQ 342
>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 273 bits (699), Expect = 1e-71
Identities = 125/198 (63%), Positives = 160/198 (80%)
Frame = -3
Query: 596 CARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITW 417
CA+LAS +HGQ VHGK++ G++N+LLVSSAL+DMYSKCG I DA +VF +P++NV++W
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391
Query: 416 NSMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRK 237
N+MI+G A NG D AL+L+E MLQQ KPDNVTF+G+LSAC+H EQGQ YFDSI
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITN 451
Query: 236 FHGMTPTLDHYACVINILGRSGSVDKAVALIEDMEHTPNSLIWSTLLSVCKMCSDIENGE 57
HGMTPTLDHYAC++N+LGR+G +++AVALI++M H P+ LIWSTLLS+C DI N E
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAE 511
Query: 56 IAAKHLFELDPFNAEPYV 3
+AA+HLFELDP A PY+
Sbjct: 512 VAARHLFELDPTIAVPYI 529
Score = 87.8 bits (216), Expect = 1e-15
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Frame = -3
Query: 593 ARLASFYHGQVVHGKAVHMGVDNDLLVSSALVDMYSKCGEITDAWTVFTAVPSKNVITWN 414
A+L+ +G+ +HG + ++ + +AL DMY+KCGEI A +F + KN+++WN
Sbjct: 166 AQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWN 225
Query: 413 SMIIGYAHNGMDIVALDLYEEMLQQNLKPDNVTFVGVLSACMHAGLTEQGQRYFDSIRKF 234
MI GYA NG + L +M PD VT +++A G ++ +R F ++
Sbjct: 226 LMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE- 284
Query: 233 HGMTPTLDHYACVINILGRSGSVDKAVALIEDM--EH-TPNSLIWSTLLSVCKMCSDIEN 63
+ + ++ ++G + A+ L +M EH P+S S+++S C + + +
Sbjct: 285 ----KDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH 340
Query: 62 GE 57
G+
Sbjct: 341 GQ 342