BLASTX nr result

ID: Cnidium21_contig00030384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030384
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   181   7e-44
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   179   3e-43
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   155   7e-36
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   125   5e-27
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...   124   1e-26

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  181 bits (460), Expect = 7e-44
 Identities = 87/178 (48%), Positives = 122/178 (68%), Gaps = 8/178 (4%)
 Frame = -1

Query: 621 GGGGPVNTSGNWKYRKLDMPLFDGEDPDGWILRVERYFSFYRLSEEEKMEAAIVGMEGEA 442
           G  GP    GNW+++KLDMP FD  DPDGWILR ER+F+FY L++ EKMEAA+V MEG+A
Sbjct: 164 GHSGP---GGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDA 220

Query: 441 LSWYQWEHRRRPIRVWAELRELLLKQFRPVK--------RTMVSGVAVWISGGLSFIKLV 286
           L WYQWE++RRP R W  ++  +L QFRP+          +     +VW      F++  
Sbjct: 221 LRWYQWENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVW-EYRRKFVETA 279

Query: 285 APLENVPENILMGQFINGLKDEVKAEVRLLNPINLDWAMDLAVRVEEKKIMLGPIKEG 112
           APL+ +PE ILMG+FI+GL  E+++E+R+LNP NLD AM+LA+++EE+  + G  + G
Sbjct: 280 APLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTG 337


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  179 bits (455), Expect = 3e-43
 Identities = 86/169 (50%), Positives = 122/169 (72%), Gaps = 9/169 (5%)
 Frame = -1

Query: 621 GGGGPVNTSGNWKYRKLDMPLFDGEDPDGWILRVERYFSFYRLSEEEKMEAAIVGMEGEA 442
           G GG     G+W+ +KLD+P+F G +PDGWI+R ER+F FYRL+E+EK+EAA+V ++GEA
Sbjct: 86  GFGGGFRGGGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEA 145

Query: 441 LSWYQWEHRRRPIRVWAELRELLLKQFRPVKRTMVSGVAVWISG---------GLSFIKL 289
           L WYQWE+RRRPI  W+E+R +LL++FR  +  + S    W+S             FI+L
Sbjct: 146 LLWYQWENRRRPIHRWSEMRWMLLRRFR--ETALGSLQEQWLSHEQEEGVVEYRRKFIEL 203

Query: 288 VAPLENVPENILMGQFINGLKDEVKAEVRLLNPINLDWAMDLAVRVEEK 142
           +APLE +PE+I   QF++ LK+E+K EVR++ P +LD AM+LAV+VEEK
Sbjct: 204 LAPLEGIPESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEK 252


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  155 bits (391), Expect = 7e-36
 Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
 Frame = -1

Query: 621 GGGGPVNTSGNWKYRKLDMPLFDGEDPDGWILRVERYFSFYRLSEEEKMEAAIVGMEGEA 442
           G  G     G WK ++LD+P+F G +PDGWILR ERYF FYRL+ EE++EAA+V ++GEA
Sbjct: 66  GYEGGFRGGGGWKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEA 125

Query: 441 LSWYQWEHRRRPIRVWAELRELLLKQFRPVKRTMVSGVAVWIS----GGLS-----FIKL 289
           L W+QWEHR RPI  W E++ +LL+QFR     + S    W++    G +      FI+L
Sbjct: 126 LLWFQWEHRHRPITGWPEMKAMLLRQFRDT--ALGSLQEQWMNHHQEGSVKEYKSRFIEL 183

Query: 288 VAPLENVPENILMGQFINGLKDEVKAEVRLLNPIN 184
           +APL+N+PENI   QFI+ LK+E+K E+R+   +N
Sbjct: 184 MAPLDNIPENIAQAQFISKLKEEIKNEMRIEEKLN 218


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  125 bits (315), Expect = 5e-27
 Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
 Frame = -1

Query: 597  SGNWK-YRKLDMPLFDGEDPDGWILRVERYFSFYRLSEEEKMEAAIVGMEGEALSWYQWE 421
            +G W+  R+++MP+F GE+PDGWI R +RYF+ Y L+EEEK+ AA + ++G+ALSWYQW 
Sbjct: 764  NGEWRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWT 823

Query: 420  HRRRPIRVWAELRELLLKQFRPVKRTMV--SGVAVWISGGLS-----FIKLVAPLENVPE 262
              R     W  L+  LL +FR  +   +    +AV   G ++     F  L  PL+ + E
Sbjct: 824  DSREVFGSWENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISE 883

Query: 261  NILMGQFINGLKDEVKAEVRLLNPINLDWAMDLAVRVEEKKIMLGPIKE 115
             ++   F+NGL  E++AE RLL P  L   M++A RVE++ + +   +E
Sbjct: 884  EVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAARE 932


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score =  124 bits (312), Expect = 1e-26
 Identities = 63/172 (36%), Positives = 99/172 (57%), Gaps = 7/172 (4%)
 Frame = -1

Query: 621 GGGGPVNTSGNWKYRKLDMPLFDGEDPDGWILRVERYFSFYRLSEEEKMEAAIVGMEGEA 442
           G  GP         RKL +P+F+GE+PDGWI R ERYF    +   ++++AA V +EG+A
Sbjct: 92  GAAGPTYIPAPLWPRKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDA 151

Query: 441 LSWYQWEHRRRPIRVWAELRELLLKQFRPVKRTMVSGVAVWISGGLS-------FIKLVA 283
           L+W+QWE  RRP R W + +E L+  FR  +   +    + +    +       F  + A
Sbjct: 152 LAWFQWEEGRRPFRSWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAA 211

Query: 282 PLENVPENILMGQFINGLKDEVKAEVRLLNPINLDWAMDLAVRVEEKKIMLG 127
           PL+ + E++L   F+NGL+ +++AE+R  +P  LD  M +A ++EEK   LG
Sbjct: 212 PLKGLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKKMQVAQKIEEKLKALG 263


Top