BLASTX nr result

ID: Cnidium21_contig00030339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030339
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33346.3| unnamed protein product [Vitis vinifera]              281   3e-74
ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis ...   281   3e-74
gb|AAK66161.1| pectate lyase [Fragaria x ananassa]                    281   4e-74
ref|XP_002518146.1| Pectate lyase precursor, putative [Ricinus c...   280   9e-74
gb|ADD62392.1| pectase lyase [Prunus persica]                         279   1e-73

>emb|CBI33346.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  281 bits (720), Expect = 3e-74
 Identities = 131/136 (96%), Positives = 134/136 (98%)
 Frame = -3

Query: 409 GRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMN 230
           GRNAIGGRDGRFYVVTD GDDDPVNP+PGTLRHAVIQD PLWIVFKRDMVITLKQELIMN
Sbjct: 109 GRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQDAPLWIVFKRDMVITLKQELIMN 168

Query: 229 SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 50
           SFKTIDGRGVNVHIANGACIT+QFVTNVI+HGLHIHDCKPTGNAMVRSSPSHFGWRTMAD
Sbjct: 169 SFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 228

Query: 49  GDAISIFGSSHIWVDH 2
           GDAISIFGSSHIWVDH
Sbjct: 229 GDAISIFGSSHIWVDH 244


>ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis vinifera]
          Length = 432

 Score =  281 bits (720), Expect = 3e-74
 Identities = 131/136 (96%), Positives = 134/136 (98%)
 Frame = -3

Query: 409 GRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMN 230
           GRNAIGGRDGRFYVVTD GDDDPVNP+PGTLRHAVIQD PLWIVFKRDMVITLKQELIMN
Sbjct: 111 GRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQDAPLWIVFKRDMVITLKQELIMN 170

Query: 229 SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 50
           SFKTIDGRGVNVHIANGACIT+QFVTNVI+HGLHIHDCKPTGNAMVRSSPSHFGWRTMAD
Sbjct: 171 SFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 230

Query: 49  GDAISIFGSSHIWVDH 2
           GDAISIFGSSHIWVDH
Sbjct: 231 GDAISIFGSSHIWVDH 246


>gb|AAK66161.1| pectate lyase [Fragaria x ananassa]
          Length = 368

 Score =  281 bits (719), Expect = 4e-74
 Identities = 133/136 (97%), Positives = 133/136 (97%)
 Frame = -3

Query: 409 GRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMN 230
           GRNAIGGRDGRFYVVTD  DDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVI LKQELIMN
Sbjct: 47  GRNAIGGRDGRFYVVTDPNDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQELIMN 106

Query: 229 SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 50
           SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD
Sbjct: 107 SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 166

Query: 49  GDAISIFGSSHIWVDH 2
           GDAISIFGSSHIWVDH
Sbjct: 167 GDAISIFGSSHIWVDH 182


>ref|XP_002518146.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223542742|gb|EEF44279.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 376

 Score =  280 bits (716), Expect = 9e-74
 Identities = 130/136 (95%), Positives = 134/136 (98%)
 Frame = -3

Query: 409 GRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMN 230
           GRNAIGGRDGRFYVVTD+GDDDPVNP+PGTLRHAVIQDEPLWIVFKRDMVI LKQELIMN
Sbjct: 130 GRNAIGGRDGRFYVVTDAGDDDPVNPKPGTLRHAVIQDEPLWIVFKRDMVIQLKQELIMN 189

Query: 229 SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 50
           SFKTIDGRG NVHIANGACITIQFVTNVI+HGLHIHDCKPTGNAMVRSSPSH+GWRTMAD
Sbjct: 190 SFKTIDGRGANVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMAD 249

Query: 49  GDAISIFGSSHIWVDH 2
           GDAISIFGSSHIWVDH
Sbjct: 250 GDAISIFGSSHIWVDH 265


>gb|ADD62392.1| pectase lyase [Prunus persica]
          Length = 445

 Score =  279 bits (714), Expect = 1e-73
 Identities = 129/136 (94%), Positives = 134/136 (98%)
 Frame = -3

Query: 409 GRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMN 230
           GRNAIGGRDGRFYVVTD GDDDPVNPRPGTLRHAVIQ+EPLWIVFKRDMVI LKQELIMN
Sbjct: 124 GRNAIGGRDGRFYVVTDPGDDDPVNPRPGTLRHAVIQNEPLWIVFKRDMVIQLKQELIMN 183

Query: 229 SFKTIDGRGVNVHIANGACITIQFVTNVIVHGLHIHDCKPTGNAMVRSSPSHFGWRTMAD 50
           SFKTIDGRGVNVHIANGACITIQFVTN+I+HGLHIHDCKPTGNA+VRSSPSHFGWRTMAD
Sbjct: 184 SFKTIDGRGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNALVRSSPSHFGWRTMAD 243

Query: 49  GDAISIFGSSHIWVDH 2
           GDA+SIFGSSHIWVDH
Sbjct: 244 GDAVSIFGSSHIWVDH 259


Top