BLASTX nr result

ID: Cnidium21_contig00030317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030317
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324381.1| sarcosine oxidase [Populus trichocarpa] gi|2...   265   7e-69
ref|XP_002535101.1| sarcosine oxidase, putative [Ricinus communi...   259   4e-67
ref|XP_002330755.1| sarcosine oxidase [Populus trichocarpa] gi|2...   256   4e-66
ref|XP_002272090.1| PREDICTED: probable sarcosine oxidase-like [...   250   2e-64
ref|NP_180034.1| putative sarcosine oxidase [Arabidopsis thalian...   245   6e-63

>ref|XP_002324381.1| sarcosine oxidase [Populus trichocarpa] gi|222865815|gb|EEF02946.1|
           sarcosine oxidase [Populus trichocarpa]
          Length = 411

 Score =  265 bits (677), Expect = 7e-69
 Identities = 131/240 (54%), Positives = 165/240 (68%)
 Frame = +3

Query: 3   GSSHGESRTLRATYPEEYYSSMVIKSAQLWEEAETEIGFNVYFKASQFDMGPEDNKSLLS 182
           GSSHGESRT+RATYPE+YY  MV++S+Q WE+A++EIG+ VYFKA QFDMGP DNKSLLS
Sbjct: 46  GSSHGESRTIRATYPEDYYCDMVMESSQSWEQAQSEIGYKVYFKAQQFDMGPSDNKSLLS 105

Query: 183 VIDNCEKNGISHRVLDARQVFDEFTERIVVPENWVGLVTQIGGVIRTTKAVYMFQSLALK 362
           VI +CE+  + H+VLD +QV D F+ RI +PE+WVG++T++GGVI+ TKAV MFQ+LA +
Sbjct: 106 VISSCERKSLPHQVLDGQQVADRFSGRINIPESWVGVLTEVGGVIKPTKAVSMFQALAFQ 165

Query: 363 HGCSLKDNSEVVDIRRDSVRGGILVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETF 542
            G  L+DN EV +I +D  RGG+ V                                E +
Sbjct: 166 KGAVLRDNMEVKNIVKDEARGGVNV---------------------------VVANGEEY 198

Query: 543 WCKKCVVTVGAWMQKLIKQVCGVVLPIQPLETCVFYWKIKDDQATKFTIGSGFPSFASYG 722
           W KKCVVT GAWM KL+K V G+ LPIQ LET V YW+IK+    KF IGS FP+FASYG
Sbjct: 199 WGKKCVVTAGAWMGKLVKTVSGLELPIQALETTVCYWRIKEGHEAKFAIGSDFPTFASYG 258


>ref|XP_002535101.1| sarcosine oxidase, putative [Ricinus communis]
           gi|223524032|gb|EEF27281.1| sarcosine oxidase, putative
           [Ricinus communis]
          Length = 411

 Score =  259 bits (662), Expect = 4e-67
 Identities = 128/240 (53%), Positives = 167/240 (69%)
 Frame = +3

Query: 3   GSSHGESRTLRATYPEEYYSSMVIKSAQLWEEAETEIGFNVYFKASQFDMGPEDNKSLLS 182
           GSSHGESRT+RATYPE+YY +M I+S  LWEEA++EIGF VYFKA   DMGP DNKSLLS
Sbjct: 46  GSSHGESRTIRATYPEDYYCAMAIESFPLWEEAQSEIGFKVYFKAQHLDMGPSDNKSLLS 105

Query: 183 VIDNCEKNGISHRVLDARQVFDEFTERIVVPENWVGLVTQIGGVIRTTKAVYMFQSLALK 362
           VI +C+KN +S +VLD++QV ++F+ RI +PENW+G+  ++GGV+R TKAV MFQSLA +
Sbjct: 106 VISSCKKNSVSFQVLDSQQVPEKFSGRINIPENWIGVSAELGGVLRPTKAVSMFQSLASR 165

Query: 363 HGCSLKDNSEVVDIRRDSVRGGILVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETF 542
            G  L+DN+EV +I +D VRGG+ V                                E F
Sbjct: 166 KGAVLRDNTEVNNIIKDDVRGGLWV---------------------------FAANGEKF 198

Query: 543 WCKKCVVTVGAWMQKLIKQVCGVVLPIQPLETCVFYWKIKDDQATKFTIGSGFPSFASYG 722
           W +KCV+T GAW++KL+K V G+ LPIQ LET V YW+IK+   ++FT+G  FP+FASYG
Sbjct: 199 WAEKCVITAGAWVRKLVKTVSGLDLPIQALETTVCYWRIKEGHESEFTMGVDFPTFASYG 258


>ref|XP_002330755.1| sarcosine oxidase [Populus trichocarpa] gi|222872557|gb|EEF09688.1|
           sarcosine oxidase [Populus trichocarpa]
          Length = 401

 Score =  256 bits (653), Expect = 4e-66
 Identities = 127/240 (52%), Positives = 162/240 (67%)
 Frame = +3

Query: 3   GSSHGESRTLRATYPEEYYSSMVIKSAQLWEEAETEIGFNVYFKASQFDMGPEDNKSLLS 182
           GSSHGESRTLRA Y E+YY  MV +S+Q+WE+A++EIG+ VYFKA QFDM P DNKSLLS
Sbjct: 46  GSSHGESRTLRAAYTEDYYCDMVKESSQIWEQAQSEIGYKVYFKAQQFDMSPSDNKSLLS 105

Query: 183 VIDNCEKNGISHRVLDARQVFDEFTERIVVPENWVGLVTQIGGVIRTTKAVYMFQSLALK 362
           +I +CEK  I +RVLD +QV D F+  I +PE+W G++T +GGVI+ TKAV MFQ+LA +
Sbjct: 106 IISSCEKKSIPYRVLDRQQVSDRFSGLINLPEDWFGVLTDVGGVIKPTKAVSMFQALAFQ 165

Query: 363 HGCSLKDNSEVVDIRRDSVRGGILVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETF 542
            G  L+DN EV ++ +D V+GG+ VET                              E F
Sbjct: 166 RGAVLRDNMEVKNVVKDEVKGGVNVET---------------------------ADGEKF 198

Query: 543 WCKKCVVTVGAWMQKLIKQVCGVVLPIQPLETCVFYWKIKDDQATKFTIGSGFPSFASYG 722
           W KKCV+T GAW++KL+K V G+ LPIQ LET V YW+IK+    KF IGS FP+F SYG
Sbjct: 199 WGKKCVITAGAWVRKLVKTVGGLELPIQALETTVCYWRIKEGHEAKFAIGSDFPTFVSYG 258


>ref|XP_002272090.1| PREDICTED: probable sarcosine oxidase-like [Vitis vinifera]
          Length = 431

 Score =  250 bits (638), Expect = 2e-64
 Identities = 126/240 (52%), Positives = 162/240 (67%)
 Frame = +3

Query: 3   GSSHGESRTLRATYPEEYYSSMVIKSAQLWEEAETEIGFNVYFKASQFDMGPEDNKSLLS 182
           GSSHGESRT+RATYPE YY  MV+++A+LWE+ ++E+G+ VY+K  QFDMGP D+KSL  
Sbjct: 46  GSSHGESRTIRATYPENYYFGMVVEAAKLWEQVQSEVGYKVYYKTPQFDMGPSDDKSLRC 105

Query: 183 VIDNCEKNGISHRVLDARQVFDEFTERIVVPENWVGLVTQIGGVIRTTKAVYMFQSLALK 362
           VI NCE   +  RVLD  QV D F+ ++ +PENW+G++T++GGVI+ TKAV MFQ+LAL+
Sbjct: 106 VIANCESYSMPCRVLDPAQVSDHFSGKMAIPENWIGVLTELGGVIKPTKAVSMFQTLALQ 165

Query: 363 HGCSLKDNSEVVDIRRDSVRGGILVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETF 542
           +G  L DN EV DI++D   GGI+V T                                F
Sbjct: 166 NGAVLMDNMEVKDIKKDD-GGGIVVHT---------------------------SNGAKF 197

Query: 543 WCKKCVVTVGAWMQKLIKQVCGVVLPIQPLETCVFYWKIKDDQATKFTIGSGFPSFASYG 722
              KCVVTVGAWM+KL+K V G +LP+QP+ET V YWKIKD    +FTI SGFP+FASYG
Sbjct: 198 CGNKCVVTVGAWMKKLVKTVSGPLLPVQPIETTVCYWKIKDGHHGEFTIESGFPTFASYG 257


>ref|NP_180034.1| putative sarcosine oxidase [Arabidopsis thaliana]
           gi|20139956|sp|Q9SJA7.1|SOX_ARATH RecName: Full=Probable
           sarcosine oxidase gi|4572673|gb|AAD23888.1| putative
           sarcosine oxidase [Arabidopsis thaliana]
           gi|17529040|gb|AAL38730.1| putative sarcosine oxidase
           [Arabidopsis thaliana] gi|21436151|gb|AAM51322.1|
           putative sarcosine oxidase [Arabidopsis thaliana]
           gi|46251338|gb|AAS84616.1| peroxisomal
           sarcosine/pipecolate oxidase [Arabidopsis thaliana]
           gi|110742357|dbj|BAE99101.1| putative sarcosine oxidase
           [Arabidopsis thaliana] gi|330252500|gb|AEC07594.1|
           putative sarcosine oxidase [Arabidopsis thaliana]
          Length = 416

 Score =  245 bits (626), Expect = 6e-63
 Identities = 118/241 (48%), Positives = 163/241 (67%), Gaps = 1/241 (0%)
 Frame = +3

Query: 3   GSSHGESRTLRATYPEEYYSSMVIKSAQLWEEAETEIGFNVYFKASQFDMGPEDNKSLLS 182
           GSSHGESRT+RATYPE+YY SMV +S +LW  A++EIG+ V+F   QFDMGP D +SLLS
Sbjct: 47  GSSHGESRTIRATYPEDYYYSMVSESTRLWAAAQSEIGYKVHFPTQQFDMGPADQQSLLS 106

Query: 183 VIDNCEKNGISHRVLDARQVFDEFTERIVVPENWVGLVTQIGGVIRTTKAVYMFQSLALK 362
           V+  C+K+G++HRV+D+  V + F+ RI +PENW+G+ T++GG+I+ TKAV MFQ+LA+ 
Sbjct: 107 VVATCQKHGLAHRVMDSHAVSEHFSGRISIPENWIGVSTELGGIIKPTKAVSMFQTLAIG 166

Query: 363 HGCSLKDNSEVVDIRRDSVRG-GILVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXET 539
           HG  L+DN++V +I+RD   G G++V T                              + 
Sbjct: 167 HGAILRDNTKVANIKRDGESGEGVIVCT---------------------------VKGDK 199

Query: 540 FWCKKCVVTVGAWMQKLIKQVCGVVLPIQPLETCVFYWKIKDDQATKFTIGSGFPSFASY 719
           F+ KKC+VT GAW+ KL+K V G+  P++PLET V YW+IK+    KFTI   FP+FASY
Sbjct: 200 FYGKKCIVTAGAWISKLVKTVAGIDFPVEPLETTVCYWRIKEGHEEKFTIDGEFPTFASY 259

Query: 720 G 722
           G
Sbjct: 260 G 260


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