BLASTX nr result

ID: Cnidium21_contig00030310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030310
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...    65   7e-09
emb|CBI27426.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...    65   7e-09
ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding pro...    64   2e-08

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -2

Query: 115 KIGAEIFKRALSYPARQIAKNAGVNGNVVIEKVLSVDD 2
           KIGAEIFKRAL+YPAR IAKNAGVN +VVIEKVLS DD
Sbjct: 465 KIGAEIFKRALTYPARLIAKNAGVNDSVVIEKVLSNDD 502


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -2

Query: 115 KIGAEIFKRALSYPARQIAKNAGVNGNVVIEKVLSVDD 2
           KIGAEIFKRAL+YPAR IAKNAGVN +VVIEKVLS DD
Sbjct: 439 KIGAEIFKRALTYPARLIAKNAGVNDSVVIEKVLSNDD 476


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -2

Query: 115 KIGAEIFKRALSYPARQIAKNAGVNGNVVIEKVLSVDD 2
           KIGAEIFKRALSYP R IAKNAGVNGN+VI ++LS DD
Sbjct: 474 KIGAEIFKRALSYPTRLIAKNAGVNGNIVINQILSNDD 511


>ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = -2

Query: 115 KIGAEIFKRALSYPARQIAKNAGVNGNVVIEKVLSVDD 2
           KIGAEIFKRALSYPAR IAKNAGVNGNVVI +VLS  D
Sbjct: 410 KIGAEIFKRALSYPARLIAKNAGVNGNVVINQVLSNAD 447


>ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 575

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -2

Query: 115 KIGAEIFKRALSYPARQIAKNAGVNGNVVIEKVLSVDD 2
           +IGAEIF+RALSYP R IAKNAGVNGNV+I+KVLS D+
Sbjct: 439 QIGAEIFRRALSYPTRMIAKNAGVNGNVIIDKVLSDDN 476


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