BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030304
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   103   2e-20
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
emb|CBI36755.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat...    77   1e-12
ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    77   2e-12

>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/94 (57%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
 Frame = -1

Query: 274 SYGDVSSVAKLFDRITQPSVLLYNSVVRAFTNSGCCGYT---LEVYNQMHFLGFHADHFT 104
           S GD+ S   +FDRI  PS LLYNS++RA+T  G        LE Y +MHFLG   D+FT
Sbjct: 124 SSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFT 183

Query: 103 LPFVLKSCAELFRVGLGECVHGVILRSGLELDVY 2
           LPFVLKSCA+L RV +G CVHG  LR GLE D Y
Sbjct: 184 LPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFY 217


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/91 (49%), Positives = 60/91 (65%)
 Frame = -1

Query: 274 SYGDVSSVAKLFDRITQPSVLLYNSVVRAFTNSGCCGYTLEVYNQMHFLGFHADHFTLPF 95
           S GD+ S   +F+ I +PS LL+NS++RA+   G    T+  Y  MH  GF  D+FT PF
Sbjct: 117 SSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPF 176

Query: 94  VLKSCAELFRVGLGECVHGVILRSGLELDVY 2
           VLKS  EL  V +G+CVHG+ILR GL+ D+Y
Sbjct: 177 VLKSSVELLSVWMGKCVHGLILRIGLQFDLY 207


>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/89 (37%), Positives = 59/89 (66%)
 Frame = -1

Query: 268 GDVSSVAKLFDRITQPSVLLYNSVVRAFTNSGCCGYTLEVYNQMHFLGFHADHFTLPFVL 89
           G+++    +F++I +PS+ ++NS+++ ++ S      L +Y +M   G+  DHFT PFVL
Sbjct: 53  GNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVL 112

Query: 88  KSCAELFRVGLGECVHGVILRSGLELDVY 2
           K+C+ +    LG+CVH  I+++G E+DVY
Sbjct: 113 KACSLVNGYNLGQCVHNCIVKTGFEVDVY 141


>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/89 (37%), Positives = 59/89 (66%)
 Frame = -1

Query: 268 GDVSSVAKLFDRITQPSVLLYNSVVRAFTNSGCCGYTLEVYNQMHFLGFHADHFTLPFVL 89
           G+++    +F++I +PS+ ++NS+++ ++ S      L +Y +M   G+  DHFT PFVL
Sbjct: 53  GNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVL 112

Query: 88  KSCAELFRVGLGECVHGVILRSGLELDVY 2
           K+C+ +    LG+CVH  I+++G E+DVY
Sbjct: 113 KACSLVNGYNLGQCVHNCIVKTGFEVDVY 141


>ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g05240-like [Glycine max]
          Length = 552

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = -1

Query: 271 YGDVSSVAKLFDRITQPSVLLYNSVVRAFTNSGCCGYTLEVYNQMHFLGFHADHFTLPFV 92
           +GD+++   +F +I  PSV ++NS++R F N+     ++ +Y Q+   G+  DHFT PFV
Sbjct: 40  FGDINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFV 99

Query: 91  LKSCAELFRVGLGECVHGVILRSGLELDVY 2
           LK+C  +     G+C+H  I++SG E D Y
Sbjct: 100 LKACCAIADQDCGKCIHCCIVKSGFEADAY 129