BLASTX nr result

ID: Cnidium21_contig00030258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030258
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]   139   3e-31
ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cy...   137   1e-30
emb|CBI36032.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002299747.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002515938.1| polyadenylate-binding protein, putative [Ric...   133   2e-29

>emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
          Length = 555

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/116 (61%), Positives = 85/116 (73%)
 Frame = -3

Query: 348 ASLYVGDLDPEVTQMDLTRLFGRVGPLDSVRLCRNRDYPFNSLCYAYVNFIYPYHASEAL 169
           A+LYVGDLDPEV++++L  +F  +GPL SVRLCR+      SLCYAYVNF YP  AS+AL
Sbjct: 29  AALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRD-SLSGKSLCYAYVNFFYPSDASKAL 87

Query: 168 EALNYYKLKGKSMRIMWSQRDPLTRKNGVANLYVKNLDSSITNTRLHTIFSKYVTI 1
             LN+ KL GK MRIMWS RDPL RK G+ANL+VKNLD SI +  L  IF K+  I
Sbjct: 88  ACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNI 143


>ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Vitis vinifera]
          Length = 630

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/116 (60%), Positives = 85/116 (73%)
 Frame = -3

Query: 348 ASLYVGDLDPEVTQMDLTRLFGRVGPLDSVRLCRNRDYPFNSLCYAYVNFIYPYHASEAL 169
           A+LYVGDLDPEV++++L  +F  +GPL SVRLCR+      SLCYAYVNF +P  AS+AL
Sbjct: 29  AALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRD-SLSGKSLCYAYVNFFHPSDASKAL 87

Query: 168 EALNYYKLKGKSMRIMWSQRDPLTRKNGVANLYVKNLDSSITNTRLHTIFSKYVTI 1
             LN+ KL GK MRIMWS RDPL RK G+ANL+VKNLD SI +  L  IF K+  I
Sbjct: 88  ACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNI 143


>emb|CBI36032.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/116 (60%), Positives = 85/116 (73%)
 Frame = -3

Query: 348 ASLYVGDLDPEVTQMDLTRLFGRVGPLDSVRLCRNRDYPFNSLCYAYVNFIYPYHASEAL 169
           A+LYVGDLDPEV++++L  +F  +GPL SVRLCR+      SLCYAYVNF +P  AS+AL
Sbjct: 29  AALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRD-SLSGKSLCYAYVNFFHPSDASKAL 87

Query: 168 EALNYYKLKGKSMRIMWSQRDPLTRKNGVANLYVKNLDSSITNTRLHTIFSKYVTI 1
             LN+ KL GK MRIMWS RDPL RK G+ANL+VKNLD SI +  L  IF K+  I
Sbjct: 88  ACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNI 143


>ref|XP_002299747.1| predicted protein [Populus trichocarpa] gi|222847005|gb|EEE84552.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  135 bits (341), Expect = 3e-30
 Identities = 73/116 (62%), Positives = 82/116 (70%)
 Frame = -3

Query: 348 ASLYVGDLDPEVTQMDLTRLFGRVGPLDSVRLCRNRDYPFNSLCYAYVNFIYPYHASEAL 169
           ASLYVGDLDPEVT+ DL   F  VGP+ S+RLCR R     SLCYAYVN      AS AL
Sbjct: 17  ASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCR-LTGKSLCYAYVNLYSHAQASRAL 75

Query: 168 EALNYYKLKGKSMRIMWSQRDPLTRKNGVANLYVKNLDSSITNTRLHTIFSKYVTI 1
             LN+  LKGK MRIMW QRDP  RK G ANL+VKNLD SI+++ L +IFSKY TI
Sbjct: 76  GLLNHTNLKGKPMRIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTI 131


>ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223544843|gb|EEF46358.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 608

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/121 (56%), Positives = 84/121 (69%)
 Frame = -3

Query: 363 DASKTASLYVGDLDPEVTQMDLTRLFGRVGPLDSVRLCRNRDYPFNSLCYAYVNFIYPYH 184
           D     SLYVGDLDPEVT+M+L  +F  +GP+ +V LCR       SLCY YVNF  PY 
Sbjct: 14  DPRPRLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRC-SLTGRSLCYGYVNFYRPYD 72

Query: 183 ASEALEALNYYKLKGKSMRIMWSQRDPLTRKNGVANLYVKNLDSSITNTRLHTIFSKYVT 4
           A +AL  LN+  LKGK MRIMW QR+P  RK+G+ NLYVKNLD+SI +  L ++FSK+ T
Sbjct: 73  AYKALSNLNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLDASIDSAGLQSLFSKFGT 132

Query: 3   I 1
           I
Sbjct: 133 I 133


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