BLASTX nr result

ID: Cnidium21_contig00030256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030256
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
gb|AFW56037.1| putative MYB DNA-binding domain superfamily prote...    69   4e-10
ref|NP_001136626.1| uncharacterized protein LOC100216751 [Zea ma...    69   4e-10
ref|XP_002311443.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|NP_001131917.2| uncharacterized protein LOC100193306 [Zea ma...    67   1e-09

>ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|222864997|gb|EEF02128.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/97 (45%), Positives = 53/97 (54%)
 Frame = +3

Query: 3   GLTNDEVKSHLQKYRLHEKPXXXXXXXXXXXXXNLXXXXXXQTAPQFVVLGGVWVSPLEY 182
           GLTNDEVKSHLQKYRLH +                      Q APQFVV+GG+WV P EY
Sbjct: 263 GLTNDEVKSHLQKYRLHTR-----------RPSPTIHTNSSQQAPQFVVVGGIWVPPTEY 311

Query: 183 ACTVARASQPGEGKETTMLPAPPDGIYAPKALRAQPP 293
           A   A  +    G+ +T+  A  +GIYAP  + A PP
Sbjct: 312 AAVAATTT---AGETSTISAA--NGIYAP--IAAPPP 341


>gb|AFW56037.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 459

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 46/106 (43%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
 Frame = +3

Query: 3   GLTNDEVKSHLQKYRLHEKPXXXXXXXXXXXXXNLXXXXXXQTAPQFVVLGGVWVSPLEY 182
           GLTNDEVKSHLQKYRLH +              ++        APQFVV+GG+WV P EY
Sbjct: 316 GLTNDEVKSHLQKYRLHTRRPNSAAAAVQSGGTSV---VAPPAAPQFVVVGGIWVPPPEY 372

Query: 183 ACTV----ARASQP------GEGKETTMLPAPPDGIYAPKALRAQP 290
           A  V    A A+QP      G+   TT   A  D +YAP A    P
Sbjct: 373 AAAVAVAAAAAAQPQQVHLAGDASGTTTTAA--DKVYAPVATTLTP 416


>ref|NP_001136626.1| uncharacterized protein LOC100216751 [Zea mays]
           gi|194696422|gb|ACF82295.1| unknown [Zea mays]
          Length = 459

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 46/106 (43%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
 Frame = +3

Query: 3   GLTNDEVKSHLQKYRLHEKPXXXXXXXXXXXXXNLXXXXXXQTAPQFVVLGGVWVSPLEY 182
           GLTNDEVKSHLQKYRLH +              ++        APQFVV+GG+WV P EY
Sbjct: 316 GLTNDEVKSHLQKYRLHTRRPNSAAAAVQSGGTSV---VAPPAAPQFVVVGGIWVPPPEY 372

Query: 183 ACTV----ARASQP------GEGKETTMLPAPPDGIYAPKALRAQP 290
           A  V    A A+QP      G+   TT   A  D +YAP A    P
Sbjct: 373 AAAVAVAAAAAAQPQQVHLAGDASGTTTTAA--DKVYAPVATTLTP 416


>ref|XP_002311443.1| predicted protein [Populus trichocarpa] gi|222851263|gb|EEE88810.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/97 (45%), Positives = 52/97 (53%)
 Frame = +3

Query: 3   GLTNDEVKSHLQKYRLHEKPXXXXXXXXXXXXXNLXXXXXXQTAPQFVVLGGVWVSPLEY 182
           GLTNDEVKSHLQKYRLH +                      Q APQFVV+GG+WV P EY
Sbjct: 263 GLTNDEVKSHLQKYRLHTR-----------RPSPTIHNNSNQQAPQFVVVGGIWVPPPEY 311

Query: 183 ACTVARASQPGEGKETTMLPAPPDGIYAPKALRAQPP 293
           A   A  +      ET+ + A  +GIYAP  + A PP
Sbjct: 312 AAVAATTA----SAETSPISA-ANGIYAP--IAAAPP 341


>ref|NP_001131917.2| uncharacterized protein LOC100193306 [Zea mays]
           gi|238908627|gb|ACF80541.2| unknown [Zea mays]
           gi|413916111|gb|AFW56043.1| putative MYB DNA-binding
           domain superfamily protein [Zea mays]
          Length = 453

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/102 (42%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   GLTNDEVKSHLQKYRLHEKPXXXXXXXXXXXXXNLXXXXXXQTAPQFVVLGGVWVSPLEY 182
           GLTNDEVKSHLQKYRLH +              ++        APQFVV+GG+WV P EY
Sbjct: 314 GLTNDEVKSHLQKYRLHTRRPNSAAAAVQSGGTSV---VAPPAAPQFVVVGGIWVPPPEY 370

Query: 183 ACTVARASQ------PGEGKETTMLPAPPDGIYAPKALRAQP 290
           A   A   Q       G+   TT   A  D +YAP A    P
Sbjct: 371 AAAAAAQPQQVHVHLAGDASGTTTTAA--DKVYAPVATTLTP 410


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