BLASTX nr result

ID: Cnidium21_contig00030237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030237
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Gly...   118   6e-25
ref|XP_002519272.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
gb|AFK41573.1| unknown [Lotus japonicus]                              116   2e-24
ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vit...   116   2e-24
ref|XP_002316055.1| f-box family protein [Populus trichocarpa] g...   115   5e-24

>ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Glycine max]
          Length = 372

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/77 (68%), Positives = 68/77 (88%)
 Frame = +2

Query: 278 GVFPDEIIHQILARLPMKPLFRAKCVCKLWYGLVSDEYFIQMYNELSVKNPMVLIEVTES 457
           G+FPDE++ QILARLP+K LFR K VCKLWY L  D+YFIQ+YNE+S KNPM+L+E+++S
Sbjct: 19  GIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISDS 78

Query: 458 SQFRSSLICVDNLRGVS 508
           S+ ++SLICVDNLRGVS
Sbjct: 79  SESKTSLICVDNLRGVS 95


>ref|XP_002519272.1| conserved hypothetical protein [Ricinus communis]
           gi|223541587|gb|EEF43136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/77 (67%), Positives = 68/77 (88%)
 Frame = +2

Query: 278 GVFPDEIIHQILARLPMKPLFRAKCVCKLWYGLVSDEYFIQMYNELSVKNPMVLIEVTES 457
           G+ PDEI+ QILARLP+K LFRAK VCKLWY L  D+YFIQ+YNE++ +NPMVL+E+++S
Sbjct: 6   GILPDEIVLQILARLPVKSLFRAKTVCKLWYRLSLDKYFIQLYNEVAARNPMVLVEISDS 65

Query: 458 SQFRSSLICVDNLRGVS 508
           S+ +SSL+C+DNLRGVS
Sbjct: 66  SESKSSLLCIDNLRGVS 82


>gb|AFK41573.1| unknown [Lotus japonicus]
          Length = 360

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/77 (66%), Positives = 69/77 (89%)
 Frame = +2

Query: 278 GVFPDEIIHQILARLPMKPLFRAKCVCKLWYGLVSDEYFIQMYNELSVKNPMVLIEVTES 457
           G+FPDE++ QILARLP+K LFR+K VCKLW  L SD+YF+Q+YNE+S KNPM+L+E++++
Sbjct: 7   GIFPDEVVMQILARLPVKSLFRSKTVCKLWCRLSSDKYFVQLYNEVSRKNPMILVEISDT 66

Query: 458 SQFRSSLICVDNLRGVS 508
           S+ +SSLICVD+LRGVS
Sbjct: 67  SESKSSLICVDSLRGVS 83


>ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
          Length = 357

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/77 (68%), Positives = 68/77 (88%)
 Frame = +2

Query: 278 GVFPDEIIHQILARLPMKPLFRAKCVCKLWYGLVSDEYFIQMYNELSVKNPMVLIEVTES 457
           GVFP+E+I QILARLP+K +FR+KCVC LWY L SD+YF+++YN++ VK P+VLIEVT+S
Sbjct: 4   GVFPEEVILQILARLPVKSVFRSKCVCTLWYKLCSDKYFVRLYNQVWVKKPVVLIEVTDS 63

Query: 458 SQFRSSLICVDNLRGVS 508
            + +SSLICVDNLRGVS
Sbjct: 64  LECKSSLICVDNLRGVS 80


>ref|XP_002316055.1| f-box family protein [Populus trichocarpa]
           gi|222865095|gb|EEF02226.1| f-box family protein
           [Populus trichocarpa]
          Length = 359

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/85 (64%), Positives = 68/85 (80%)
 Frame = +2

Query: 254 MNQPDLKYGVFPDEIIHQILARLPMKPLFRAKCVCKLWYGLVSDEYFIQMYNELSVKNPM 433
           MN  D   G  PDE+I Q+LARLP+K LFRAK VCKLWY L SD+YF+Q+YNE++ KN M
Sbjct: 1   MNSRD---GFLPDEVIIQVLARLPVKSLFRAKTVCKLWYKLSSDKYFVQLYNEVATKNSM 57

Query: 434 VLIEVTESSQFRSSLICVDNLRGVS 508
           VL+EV++S + +SSLIC DNLRGVS
Sbjct: 58  VLVEVSDSPELKSSLICADNLRGVS 82


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