BLASTX nr result

ID: Cnidium21_contig00030070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030070
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166754.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    68   9e-10
ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    68   9e-10
ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    64   1e-08
emb|CBI16487.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002530869.1| Ubiquitin-protein ligase bre-1, putative [Ri...    62   4e-08

>ref|XP_004166754.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           BRE1-like 2-like [Cucumis sativus]
          Length = 880

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/78 (53%), Positives = 45/78 (57%)
 Frame = +1

Query: 1   VLELTEAIKIKDGET*A*ISEIEXXXXXXXXXXXXCEPFSVC*LPFTVVQTIGQAYEDMQ 180
           +LELTEAIKIKDGE  A ISEIE                           TIGQAYEDMQ
Sbjct: 618 ILELTEAIKIKDGEAEAYISEIE---------------------------TIGQAYEDMQ 650

Query: 181 RQNQHLLQQVTDRGEYNI 234
            QNQHLLQQVT+R + NI
Sbjct: 651 TQNQHLLQQVTERDDLNI 668


>ref|XP_004142159.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Cucumis
           sativus]
          Length = 880

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/78 (53%), Positives = 45/78 (57%)
 Frame = +1

Query: 1   VLELTEAIKIKDGET*A*ISEIEXXXXXXXXXXXXCEPFSVC*LPFTVVQTIGQAYEDMQ 180
           +LELTEAIKIKDGE  A ISEIE                           TIGQAYEDMQ
Sbjct: 618 ILELTEAIKIKDGEAEAYISEIE---------------------------TIGQAYEDMQ 650

Query: 181 RQNQHLLQQVTDRGEYNI 234
            QNQHLLQQVT+R + NI
Sbjct: 651 TQNQHLLQQVTERDDLNI 668


>ref|XP_002283417.2| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Vitis
           vinifera]
          Length = 872

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/78 (52%), Positives = 44/78 (56%)
 Frame = +1

Query: 1   VLELTEAIKIKDGET*A*ISEIEXXXXXXXXXXXXCEPFSVC*LPFTVVQTIGQAYEDMQ 180
           VLEL EAI+IKD E  A ISEIE                           TIGQAYEDMQ
Sbjct: 610 VLELKEAIRIKDVEAEAYISEIE---------------------------TIGQAYEDMQ 642

Query: 181 RQNQHLLQQVTDRGEYNI 234
            QNQHLLQQVT+R +YNI
Sbjct: 643 TQNQHLLQQVTERDDYNI 660


>emb|CBI16487.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/78 (52%), Positives = 44/78 (56%)
 Frame = +1

Query: 1   VLELTEAIKIKDGET*A*ISEIEXXXXXXXXXXXXCEPFSVC*LPFTVVQTIGQAYEDMQ 180
           VLEL EAI+IKD E  A ISEIE                           TIGQAYEDMQ
Sbjct: 617 VLELKEAIRIKDVEAEAYISEIE---------------------------TIGQAYEDMQ 649

Query: 181 RQNQHLLQQVTDRGEYNI 234
            QNQHLLQQVT+R +YNI
Sbjct: 650 TQNQHLLQQVTERDDYNI 667


>ref|XP_002530869.1| Ubiquitin-protein ligase bre-1, putative [Ricinus communis]
           gi|223529558|gb|EEF31509.1| Ubiquitin-protein ligase
           bre-1, putative [Ricinus communis]
          Length = 945

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/78 (51%), Positives = 43/78 (55%)
 Frame = +1

Query: 1   VLELTEAIKIKDGET*A*ISEIEXXXXXXXXXXXXCEPFSVC*LPFTVVQTIGQAYEDMQ 180
           V ELTEAIK KD E  A ISEIE                           TIGQAYED+Q
Sbjct: 683 VWELTEAIKSKDREAEAYISEIE---------------------------TIGQAYEDLQ 715

Query: 181 RQNQHLLQQVTDRGEYNI 234
            QNQHLLQQVT+R +YNI
Sbjct: 716 TQNQHLLQQVTERDDYNI 733


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