BLASTX nr result

ID: Cnidium21_contig00030055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030055
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]   140   5e-31
ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   140   6e-31
ref|XP_002530131.1| conserved hypothetical protein [Ricinus comm...   137   5e-30
ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|2...   137   5e-30
ref|XP_002298917.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28

>emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]
          Length = 945

 Score =  140 bits (354), Expect = 5e-31
 Identities = 74/147 (50%), Positives = 88/147 (59%)
 Frame = -3

Query: 936 MLKPRETDIXXXXXXXXXXXXXXXXXLGRWSEVSKKKERLSLLTQCAGDEVFTTESXXXX 757
           ML+PRE DI                 LG+WSEV+KKK+R+SLL Q A +E F  E+    
Sbjct: 1   MLEPREADIPALFLFLIVFPLVTYILLGKWSEVTKKKKRVSLLAQLAAEEAFKAEAMATA 60

Query: 756 XXXXXXXXXPKINVHECARCYAPSMTRCSRCKSVRYCSGKCQIIHWRQAHKHECQPLEYS 577
                       N HECARC+ P+ TRCSRCKSVRYCSGKCQIIHWRQ HK ECQ LE  
Sbjct: 61  SVMPLVSSSKSGN-HECARCFGPATTRCSRCKSVRYCSGKCQIIHWRQVHKEECQQLETH 119

Query: 576 SSTSSPKFLSDEKSVRERFLFDDKLGS 496
           SS +S K  + E+SV ER   +D + S
Sbjct: 120 SSITSLKAAAIEESVHERVSVNDSMNS 146


>ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
           vinifera]
          Length = 906

 Score =  140 bits (353), Expect = 6e-31
 Identities = 74/147 (50%), Positives = 88/147 (59%)
 Frame = -3

Query: 936 MLKPRETDIXXXXXXXXXXXXXXXXXLGRWSEVSKKKERLSLLTQCAGDEVFTTESXXXX 757
           ML+PRE DI                 LG+WSEV+KKK+R+SLL Q A +E F  E+    
Sbjct: 1   MLEPREADIPALFLFLIVFPLVTYILLGKWSEVTKKKKRVSLLAQLAAEEAFKAEAMATA 60

Query: 756 XXXXXXXXXPKINVHECARCYAPSMTRCSRCKSVRYCSGKCQIIHWRQAHKHECQPLEYS 577
                       N HECARC+ P+ TRCSRCKSVRYCSGKCQIIHWRQ HK ECQ LE  
Sbjct: 61  SVMPLVSSSKSGN-HECARCFGPATTRCSRCKSVRYCSGKCQIIHWRQVHKEECQQLETH 119

Query: 576 SSTSSPKFLSDEKSVRERFLFDDKLGS 496
           SS +S K  + E+SV ER   +D + S
Sbjct: 120 SSITSLKDAAIEESVHERVSVNDSMNS 146


>ref|XP_002530131.1| conserved hypothetical protein [Ricinus communis]
           gi|223530356|gb|EEF32247.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 870

 Score =  137 bits (345), Expect = 5e-30
 Identities = 73/169 (43%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
 Frame = -3

Query: 936 MLKPRETDIXXXXXXXXXXXXXXXXXLGRWSEVSKKKERLSLLTQCAGDEVFTTESXXXX 757
           ML+PRE D+                 LG+WSE ++K+ER+SLL + A +E    ++    
Sbjct: 1   MLEPREADMPVLFMVLVVLPLVVYILLGKWSEATRKRERISLLAELAAEEALRAQAIKPI 60

Query: 756 XXXXXXXXXPKINVHECARCYAPSMTRCSRCKSVRYCSGKCQIIHWRQAHKHECQPLEYS 577
                     K  +H CARC +P+ TRCSRCKSVRYCSG CQIIHWRQ HK ECQ LE +
Sbjct: 61  PISFPFVSTTKNGIHVCARCLSPATTRCSRCKSVRYCSGNCQIIHWRQVHKQECQQLETT 120

Query: 576 SSTSSPKFLSDEKSVRERFLFDDKLGS-----NNMQGRHENATTEYMSH 445
           SS SSPK  S + S  ER   DD L       +N Q   +N T++   H
Sbjct: 121 SSCSSPKATSIQDSFPERGTVDDSLDKFYSRYSNKQVFVDNITSDKTVH 169


>ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|222860429|gb|EEE97976.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  137 bits (345), Expect = 5e-30
 Identities = 75/169 (44%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
 Frame = -3

Query: 936 MLKPRETDIXXXXXXXXXXXXXXXXXLGRWSEVSKKKERLSLLTQCAGDEVFTTESXXXX 757
           ML+PR  DI                 LG+WSE +KK+ER+SLL Q A +E F  E     
Sbjct: 1   MLEPRGADIPVLFLVLVVLPLVAYILLGKWSESAKKRERISLLAQLAAEEAFRAE-VMAT 59

Query: 756 XXXXXXXXXPKINVHECARCYAPSMTRCSRCKSVRYCSGKCQIIHWRQAHKHECQPLEYS 577
                     K  +H CARC++P+ TRCSRCKSVRYCSGKCQIIHWRQAHK ECQ LE +
Sbjct: 60  ACIIPPMSTSKNGIHVCARCFSPATTRCSRCKSVRYCSGKCQIIHWRQAHKEECQRLETT 119

Query: 576 SSTSSPKFLSDEKSVRERFLFDD-----KLGSNNMQGRHENATTEYMSH 445
           SS SSP   S ++S+ E+   +D      LG N+ Q   +   ++   H
Sbjct: 120 SSCSSPMATSCDESIPEKLSINDGLDLFSLGYNSKQPAMDTGLSDNNVH 168


>ref|XP_002298917.1| predicted protein [Populus trichocarpa] gi|222846175|gb|EEE83722.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  132 bits (331), Expect = 2e-28
 Identities = 69/143 (48%), Positives = 85/143 (59%)
 Frame = -3

Query: 936 MLKPRETDIXXXXXXXXXXXXXXXXXLGRWSEVSKKKERLSLLTQCAGDEVFTTESXXXX 757
           ML+PRE DI                 LG+W+E +KK+ER+SLL Q A +E    E     
Sbjct: 1   MLEPREADIPVLFLVLVVLPLVAYILLGKWTESAKKRERISLLAQLAAEEACRAE-VMAT 59

Query: 756 XXXXXXXXXPKINVHECARCYAPSMTRCSRCKSVRYCSGKCQIIHWRQAHKHECQPLEYS 577
                     K  +  CARC++P+ TRCSRCKSVRYCSGKCQIIHWRQAHK ECQ LE +
Sbjct: 60  THVIPPMSTSKNGIQVCARCFSPATTRCSRCKSVRYCSGKCQIIHWRQAHKEECQLLETT 119

Query: 576 SSTSSPKFLSDEKSVRERFLFDD 508
           SS SSP   S ++S+ ER   +D
Sbjct: 120 SSCSSPMATSCDESIPERLSIND 142


Top