BLASTX nr result
ID: Cnidium21_contig00030041
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00030041 (381 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi... 167 8e-40 emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera] 166 2e-39 ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|2... 164 9e-39 ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containi... 152 3e-35 ref|XP_002885037.1| pentatricopeptide repeat-containing protein ... 149 2e-34 >ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330 [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 167 bits (423), Expect = 8e-40 Identities = 80/127 (62%), Positives = 100/127 (78%) Frame = +1 Query: 1 EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180 EIHA IVKS KPD VLNSLVDMYAKCG MDYC RVF M KD+T++NT++ G+ I+G Sbjct: 300 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 359 Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360 MT+A++ F EMI SG+ PD +TFIALLSGCS+AG ++G FE M +++GI PT+EHY Sbjct: 360 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHY 419 Query: 361 ACLVDLL 381 ACLVD+L Sbjct: 420 ACLVDVL 426 >emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera] Length = 773 Score = 166 bits (419), Expect = 2e-39 Identities = 80/127 (62%), Positives = 99/127 (77%) Frame = +1 Query: 1 EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180 EIHA IVKS KPD VLNSLVDMYAKCG MDYC RVF M KD+T++NT++ G+ I+G Sbjct: 299 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 358 Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360 MT+A++ F EMI SG+ PD +TFIALLSGCS+AG ++G FE M ++ GI PT+EHY Sbjct: 359 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHY 418 Query: 361 ACLVDLL 381 ACLVD+L Sbjct: 419 ACLVDVL 425 >ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa] Length = 504 Score = 164 bits (414), Expect = 9e-39 Identities = 79/127 (62%), Positives = 99/127 (77%) Frame = +1 Query: 1 EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180 EIHAQIVKS +PDVLVLNSLVDMY KCG +DY R+F M SKD+T++NT+L G+ I+G Sbjct: 152 EIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAING 211 Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360 M A+ LF+EM G PD+VTFIALLSGCS+AG +G+ F RM ++FG+ P+LEHY Sbjct: 212 YMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHY 271 Query: 361 ACLVDLL 381 ACLVD+L Sbjct: 272 ACLVDML 278 >ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330-like [Glycine max] Length = 650 Score = 152 bits (384), Expect = 3e-35 Identities = 72/127 (56%), Positives = 98/127 (77%) Frame = +1 Query: 1 EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180 EIH QI+KS DV +LNSL+DMYAKCGE+ YC +VF M SKD+T++NT+L G +I+G Sbjct: 298 EIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSING 357 Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360 + +A+ LFDEMI G P+ +TF+ALLSGCS++G +EGK F + +FG++P+LEHY Sbjct: 358 QIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHY 417 Query: 361 ACLVDLL 381 ACLVD+L Sbjct: 418 ACLVDIL 424 >ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297330877|gb|EFH61296.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 690 Score = 149 bits (376), Expect = 2e-34 Identities = 73/127 (57%), Positives = 93/127 (73%) Frame = +1 Query: 1 EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180 EIHAQI+KS KPDV +LNSL+DMY KCG+++Y RVF M +KD+TT+NT+L + I+G Sbjct: 351 EIHAQILKSKEKPDVPLLNSLMDMYGKCGDVEYSRRVFDGMLTKDLTTWNTILNCYAING 410 Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360 + + I LF+ MI+SG PD +TF+ALLSGCS G G FERM EF + P LEHY Sbjct: 411 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGISLFERMKTEFRVSPALEHY 470 Query: 361 ACLVDLL 381 ACLVD+L Sbjct: 471 ACLVDIL 477