BLASTX nr result

ID: Cnidium21_contig00030041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030041
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]   166   2e-39
ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_002885037.1| pentatricopeptide repeat-containing protein ...   149   2e-34

>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/127 (62%), Positives = 100/127 (78%)
 Frame = +1

Query: 1   EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180
           EIHA IVKS  KPD  VLNSLVDMYAKCG MDYC RVF  M  KD+T++NT++ G+ I+G
Sbjct: 300 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 359

Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360
            MT+A++ F EMI SG+ PD +TFIALLSGCS+AG  ++G   FE M +++GI PT+EHY
Sbjct: 360 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHY 419

Query: 361 ACLVDLL 381
           ACLVD+L
Sbjct: 420 ACLVDVL 426


>emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/127 (62%), Positives = 99/127 (77%)
 Frame = +1

Query: 1   EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180
           EIHA IVKS  KPD  VLNSLVDMYAKCG MDYC RVF  M  KD+T++NT++ G+ I+G
Sbjct: 299 EIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAING 358

Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360
            MT+A++ F EMI SG+ PD +TFIALLSGCS+AG  ++G   FE M ++ GI PT+EHY
Sbjct: 359 RMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHY 418

Query: 361 ACLVDLL 381
           ACLVD+L
Sbjct: 419 ACLVDVL 425


>ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|222843383|gb|EEE80930.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/127 (62%), Positives = 99/127 (77%)
 Frame = +1

Query: 1   EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180
           EIHAQIVKS  +PDVLVLNSLVDMY KCG +DY  R+F  M SKD+T++NT+L G+ I+G
Sbjct: 152 EIHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAING 211

Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360
            M  A+ LF+EM   G  PD+VTFIALLSGCS+AG   +G+  F RM ++FG+ P+LEHY
Sbjct: 212 YMRVAMDLFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHY 271

Query: 361 ACLVDLL 381
           ACLVD+L
Sbjct: 272 ACLVDML 278


>ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/127 (56%), Positives = 98/127 (77%)
 Frame = +1

Query: 1   EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180
           EIH QI+KS    DV +LNSL+DMYAKCGE+ YC +VF  M SKD+T++NT+L G +I+G
Sbjct: 298 EIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSING 357

Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360
            + +A+ LFDEMI  G  P+ +TF+ALLSGCS++G  +EGK  F  +  +FG++P+LEHY
Sbjct: 358 QIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHY 417

Query: 361 ACLVDLL 381
           ACLVD+L
Sbjct: 418 ACLVDIL 424


>ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330877|gb|EFH61296.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 690

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/127 (57%), Positives = 93/127 (73%)
 Frame = +1

Query: 1   EIHAQIVKSCGKPDVLVLNSLVDMYAKCGEMDYCSRVFGMMGSKDVTTYNTVLKGHTISG 180
           EIHAQI+KS  KPDV +LNSL+DMY KCG+++Y  RVF  M +KD+TT+NT+L  + I+G
Sbjct: 351 EIHAQILKSKEKPDVPLLNSLMDMYGKCGDVEYSRRVFDGMLTKDLTTWNTILNCYAING 410

Query: 181 CMTQAIKLFDEMIDSGYYPDEVTFIALLSGCSYAGFMNEGKIFFERMGVEFGIKPTLEHY 360
            + + I LF+ MI+SG  PD +TF+ALLSGCS  G    G   FERM  EF + P LEHY
Sbjct: 411 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGISLFERMKTEFRVSPALEHY 470

Query: 361 ACLVDLL 381
           ACLVD+L
Sbjct: 471 ACLVDIL 477


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