BLASTX nr result

ID: Cnidium21_contig00030040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030040
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321773.1| predicted protein [Populus trichocarpa] gi|2...    42   6e-07
ref|XP_002318194.1| predicted protein [Populus trichocarpa] gi|2...    42   7e-07
ref|XP_002318196.1| predicted protein [Populus trichocarpa] gi|2...    42   8e-07
ref|XP_004156392.1| PREDICTED: LOW QUALITY PROTEIN: chaperone pr...    40   1e-06
ref|XP_004139850.1| PREDICTED: chaperone protein ClpD, chloropla...    40   1e-06

>ref|XP_002321773.1| predicted protein [Populus trichocarpa] gi|222868769|gb|EEF05900.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score = 42.0 bits (97), Expect(2) = 6e-07
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +1

Query: 52  IGQDEAIAAIIQAVKRSRVGLKD 120
           IGQDEAIAAI +AVKRSRVGLKD
Sbjct: 626 IGQDEAIAAISRAVKRSRVGLKD 648



 Score = 36.2 bits (82), Expect(2) = 6e-07
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 125 PIGALLFR*PTGVGRTELTKAFA 193
           PI A+LF  PTGVG+TELTKA A
Sbjct: 652 PIAAMLFCGPTGVGKTELTKALA 674


>ref|XP_002318194.1| predicted protein [Populus trichocarpa] gi|222858867|gb|EEE96414.1|
           predicted protein [Populus trichocarpa]
          Length = 948

 Score = 41.6 bits (96), Expect(2) = 7e-07
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +1

Query: 52  IGQDEAIAAIIQAVKRSRVGLKD 120
           IGQDEA+AAI +AVKRSRVGLKD
Sbjct: 635 IGQDEAVAAISRAVKRSRVGLKD 657



 Score = 36.2 bits (82), Expect(2) = 7e-07
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 125 PIGALLFR*PTGVGRTELTKAFA 193
           PI A+LF  PTGVG+TELTKA A
Sbjct: 661 PIAAMLFCGPTGVGKTELTKALA 683


>ref|XP_002318196.1| predicted protein [Populus trichocarpa] gi|222858869|gb|EEE96416.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 41.6 bits (96), Expect(2) = 8e-07
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +1

Query: 52  IGQDEAIAAIIQAVKRSRVGLKD 120
           IGQDEA+AAI +AVKRSRVGLKD
Sbjct: 212 IGQDEAVAAISRAVKRSRVGLKD 234



 Score = 36.2 bits (82), Expect(2) = 8e-07
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 125 PIGALLFR*PTGVGRTELTKAFA 193
           PI A+LF  PTGVG+TELTKA A
Sbjct: 238 PIAAMLFCGPTGVGKTELTKALA 260


>ref|XP_004156392.1| PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpD,
           chloroplastic-like [Cucumis sativus]
          Length = 1018

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 18/23 (78%), Positives = 22/23 (95%)
 Frame = +1

Query: 52  IGQDEAIAAIIQAVKRSRVGLKD 120
           +GQDEA++AI +AVKRSRVGLKD
Sbjct: 709 VGQDEAVSAISRAVKRSRVGLKD 731



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 17/25 (68%), Positives = 18/25 (72%)
 Frame = +2

Query: 125 PIGALLFR*PTGVGRTELTKAFAEC 199
           PI  LLF  PTGVG+TELTK  A C
Sbjct: 735 PIAVLLFCGPTGVGKTELTKVLARC 759


>ref|XP_004139850.1| PREDICTED: chaperone protein ClpD, chloroplastic-like [Cucumis
           sativus]
          Length = 949

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 18/23 (78%), Positives = 22/23 (95%)
 Frame = +1

Query: 52  IGQDEAIAAIIQAVKRSRVGLKD 120
           +GQDEA++AI +AVKRSRVGLKD
Sbjct: 640 VGQDEAVSAISRAVKRSRVGLKD 662



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 17/25 (68%), Positives = 18/25 (72%)
 Frame = +2

Query: 125 PIGALLFR*PTGVGRTELTKAFAEC 199
           PI  LLF  PTGVG+TELTK  A C
Sbjct: 666 PIAVLLFCGPTGVGKTELTKVLARC 690


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