BLASTX nr result

ID: Cnidium21_contig00030010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030010
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326789.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-12
ref|XP_002510978.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002304403.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
dbj|BAJ34572.1| unnamed protein product [Thellungiella halophila]      62   4e-08
emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|72693...    61   1e-07

>ref|XP_002326789.1| predicted protein [Populus trichocarpa] gi|222834111|gb|EEE72588.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 73.9 bits (180), Expect(2) = 6e-12
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
 Frame = -1

Query: 458 QETLSRPTSPPGNTTP----PRPT---SNLYKPKXXXXXXXXXXXXXTPLCNPFHAPMST 300
           QE +S  TS    TT     PR T   ++L                  P+      P+ST
Sbjct: 27  QEPISTNTSSSNTTTTTVTSPRATRKLNSLNNDNNTLSLSSSGSVLSVPISANSGGPIST 86

Query: 299 WASASDSSEFDEWEYVDSIDVVDENDKGLYCDENLVFGPVPSVDEVQHAVSSLQQ----- 135
           W  +   S  D++E+V   +  DE   G    ++ V GPVPS+DEV  AV++L       
Sbjct: 87  WWPSFTGSYPDDYEWVSVDESEDERLVGF--SDDFVLGPVPSMDEVHDAVTALTHVFDAP 144

Query: 134 -FQQVVKDNAANDLERNLADQVSSPAGFLRRVPWYGSEVDWMEPS 3
            + Q+++D  A  ++++LADQ+SSPA  L +V   GS+ DW EPS
Sbjct: 145 LYSQLIRDKFACTVDKDLADQISSPA-VLSQVSSVGSDFDWKEPS 188



 Score = 21.6 bits (44), Expect(2) = 6e-12
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 529 GNKGGGMLRSVHRAV 485
           G+ GG MLR V RAV
Sbjct: 4   GSGGGSMLRVVGRAV 18


>ref|XP_002510978.1| conserved hypothetical protein [Ricinus communis]
           gi|223550093|gb|EEF51580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
 Frame = -1

Query: 308 MSTWASASDSSEFDEWEYVDSIDVVDENDKGLYCDENLVFGPVPSVDEVQHAVSSLQQ-- 135
           +++W S S     DE+E+V S+D  +E        ++ V GPVPS+DEV  AVS+L Q  
Sbjct: 88  ITSWPSFSS----DEYEWV-SVDGSEEEKSF----DDFVLGPVPSLDEVHSAVSALTQVF 138

Query: 134 ----FQQVVKDNAANDLERNLADQVSSPAGFLRRVPWYGSEVDWMEPS 3
               + Q + D  A +++R +ADQ+SSP G L R      E DWMEPS
Sbjct: 139 DAASYSQFITDKFAYNVDRPVADQISSPTGILHRASPVCPEADWMEPS 186


>ref|XP_002304403.1| predicted protein [Populus trichocarpa] gi|222841835|gb|EEE79382.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 69.7 bits (169), Expect(2) = 2e-10
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
 Frame = -1

Query: 461 TQETLSRPTSPPGNTTPPRPTSNLYKPKXXXXXXXXXXXXXTPLCNPFHAPMSTWASASD 282
           T  + S  TS     T PR T  +  P               P+      P  T  S   
Sbjct: 32  TTNSSSPNTSTTTTVTSPRGTRKVISPNNLTLSSSGSALSL-PIPADSGGPGPTSWSPFS 90

Query: 281 SSEFDEWEYVDSIDVVDENDKGLYCDENLVFGPVPSVDEVQHAVSSL------QQFQQVV 120
            S  D++++V S+D   + ++ +  D++ VFGPVPS+DEV  AV++L          Q++
Sbjct: 91  VSHCDDYDWV-SVDDGSDEERPVGFDDDFVFGPVPSIDEVHEAVTALTHVFDAPSHSQLI 149

Query: 119 KDNAANDLERNLADQVSSPAGFLRRVPWYGSEVDWMEPS 3
           +D  +  ++++LA Q+S P   L RV   GSE+DW EPS
Sbjct: 150 RDKFSCTVDKDLAYQISGPT-LLNRVSSVGSELDWKEPS 187



 Score = 20.4 bits (41), Expect(2) = 2e-10
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 535 GAGNKGGGMLRSVHRAV 485
           G G+ GG +LR   RAV
Sbjct: 2   GGGSGGGSVLRVFGRAV 18


>dbj|BAJ34572.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
 Frame = -1

Query: 284 DSSEFDEWEYVDSIDVVDENDKGLYCDENLVFGPVPSVDEVQHAVSSLQQ------FQQV 123
           +S  ++++E+V S +  +E+D         VFG VPSVDEVQ AVS+LQQ      + Q+
Sbjct: 98  NSGAYEDFEWV-SEEGTEEDDS--------VFGSVPSVDEVQDAVSALQQVFDGSSYPQL 148

Query: 122 VKDNAANDLERNLADQVSSPAGFLRRVPWYGSEVDWMEPS 3
           V+D   +  E     Q     G + +VP +GS++DWMEPS
Sbjct: 149 VRDRYESYPENGGGKQSPIATGMVHQVPSFGSDLDWMEPS 188


>emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|7269367|emb|CAB79426.1|
           putative protein [Arabidopsis thaliana]
          Length = 336

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
 Frame = -1

Query: 314 APMSTWASASDSSEFDEWEYVDSIDVVDENDKGLYCDENLVFGPVPSVDEVQHAVSSLQQ 135
           A  S W+     S  +   Y D   V +E D  L       FG VPSVDEVQ AVS+LQQ
Sbjct: 77  AATSGWSGGGPFSFVNSGGYDDFEWVSEEEDDSL-------FGSVPSVDEVQDAVSALQQ 129

Query: 134 ------FQQVVKDNAANDLERNLADQVSSPAGFLRRVPWYGSEVDWMEPS 3
                 + Q+V+D      E    +Q     G + +VP +GS+ DWMEPS
Sbjct: 130 VFDASSYSQLVRDKYECYPENGGGNQSPIATGMVHQVPSFGSDSDWMEPS 179


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