BLASTX nr result

ID: Cnidium21_contig00029993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029993
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510806.1| conserved hypothetical protein [Ricinus comm...   156   1e-36
ref|XP_003536472.1| PREDICTED: F-box/LRR-repeat protein At3g4888...   150   8e-35
ref|XP_003556100.1| PREDICTED: F-box/LRR-repeat protein At3g4888...   150   1e-34
ref|XP_002321893.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
gb|AFK44482.1| unknown [Medicago truncatula]                          145   3e-33

>ref|XP_002510806.1| conserved hypothetical protein [Ricinus communis]
           gi|223549921|gb|EEF51408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/103 (68%), Positives = 91/103 (88%)
 Frame = +1

Query: 7   FLPNLKVLSLRCSMVIKEALVIILDGLEHLEVLNISHCHIVEVPPPPARKRIILKEIDDS 186
           +LP L+VLSLRCSM+IK+AL++ILD L+ LEVLNISHC ++EVP PPA KRII +E+D +
Sbjct: 206 YLPKLRVLSLRCSMLIKDALILILDSLQSLEVLNISHCLLIEVPAPPAPKRII-RELDHT 264

Query: 187 ILQKASHLRQFFTCMNDSCIMCQRSRADEGLMRWYRYEENAWK 315
           IL+KAS LR+F TCM++SCIMCQR+++DEGLMRWY+YEE  WK
Sbjct: 265 ILEKASRLREFLTCMDESCIMCQRTKSDEGLMRWYKYEEGLWK 307


>ref|XP_003536472.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Glycine max]
          Length = 304

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/103 (67%), Positives = 85/103 (82%)
 Frame = +1

Query: 7   FLPNLKVLSLRCSMVIKEALVIILDGLEHLEVLNISHCHIVEVPPPPARKRIILKEIDDS 186
           FLP L+VLSLRCSM+ K+ L++ILD L+HLEVLNISHC ++E  P P +KRII KEID +
Sbjct: 194 FLPKLRVLSLRCSMLYKDVLILILDSLQHLEVLNISHCVLMEALPAPQQKRII-KEIDVT 252

Query: 187 ILQKASHLRQFFTCMNDSCIMCQRSRADEGLMRWYRYEENAWK 315
           I QKAS LR+F TCM DSC+MCQR+R DEGL+RWY+YEE  WK
Sbjct: 253 IRQKASRLREFLTCMEDSCVMCQRTRTDEGLIRWYKYEEGLWK 295


>ref|XP_003556100.1| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Glycine max]
          Length = 305

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/103 (66%), Positives = 85/103 (82%)
 Frame = +1

Query: 7   FLPNLKVLSLRCSMVIKEALVIILDGLEHLEVLNISHCHIVEVPPPPARKRIILKEIDDS 186
           FLP L++LSLRCSM+ K+ L++ILD L+HLEVLNISHC ++E  P P +KRII KEID +
Sbjct: 195 FLPKLRILSLRCSMLYKDVLILILDNLQHLEVLNISHCVLMEALPAPQQKRII-KEIDVT 253

Query: 187 ILQKASHLRQFFTCMNDSCIMCQRSRADEGLMRWYRYEENAWK 315
           I QKAS LR+F TCM DSC+MCQR+R DEGL+RWY+YEE  WK
Sbjct: 254 IRQKASRLREFLTCMEDSCVMCQRTRTDEGLIRWYKYEEGLWK 296


>ref|XP_002321893.1| predicted protein [Populus trichocarpa] gi|222868889|gb|EEF06020.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/105 (62%), Positives = 86/105 (81%)
 Frame = +1

Query: 1   VQFLPNLKVLSLRCSMVIKEALVIILDGLEHLEVLNISHCHIVEVPPPPARKRIILKEID 180
           V +LP LKVLSLRCSM+ K+ L+ +LD L  LEVLNISHC ++EVPPPPA +RI+ +++D
Sbjct: 179 VTYLPTLKVLSLRCSMLYKDTLIFVLDNLCCLEVLNISHCLLIEVPPPPAPRRIV-RQLD 237

Query: 181 DSILQKASHLRQFFTCMNDSCIMCQRSRADEGLMRWYRYEENAWK 315
            +IL+KASHL  F  CM+D+CIMCQ++R DEGLMRWY+Y+E  WK
Sbjct: 238 KTILEKASHLHDFLACMSDTCIMCQKTRNDEGLMRWYKYDEGLWK 282


>gb|AFK44482.1| unknown [Medicago truncatula]
          Length = 305

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = +1

Query: 7   FLPNLKVLSLRCSMVIKEALVIILDGLEHLEVLNISHCHIVEVPPPPARKRIILKEIDDS 186
           F+P L+ LSLRCS + ++ L++ILD LEHLEVLNISHC ++E  PPP  K+II  EID +
Sbjct: 195 FVPKLRFLSLRCSTLYRDVLILILDSLEHLEVLNISHCILMECLPPPQHKKII-NEIDST 253

Query: 187 ILQKASHLRQFFTCMNDSCIMCQRSRADEGLMRWYRYEENAWK 315
           I QKAS LR+F TCM+DSCIMCQR+R DEG++RWY+YEE  WK
Sbjct: 254 IRQKASRLREFITCMDDSCIMCQRTRTDEGIVRWYKYEEGFWK 296


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