BLASTX nr result

ID: Cnidium21_contig00029934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029934
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307567.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vi...   134   1e-29
ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]   134   1e-29
ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29

>ref|XP_002307567.1| predicted protein [Populus trichocarpa] gi|222857016|gb|EEE94563.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/164 (45%), Positives = 101/164 (61%)
 Frame = +3

Query: 12  LRWLSWEHCPLHCLPSGFSPQKLVILDLPFSKLRTMLELNMVYKKLKTLNMSFSSSLTNT 191
           LRWL W   PL  +P     + L+ LD+ +S L    E     KKLK LN+S S  LT T
Sbjct: 25  LRWLCWLEFPLKSIPPDLYLETLIALDMRYSSLHQFSEEIKSLKKLKFLNLSHSHELTKT 84

Query: 192 PDFTKLPCLETLNLRGCVSLKEVHISIGSLVRLVFLDLGECCNLRSLPESICSLRALEYL 371
           P+F  LPCLE L L+ CVSL EVH SIG L RL+ L+   C +L++LP SIC+L +L+ L
Sbjct: 85  PNFEGLPCLEKLILKDCVSLVEVHDSIGILGRLLLLNFKNCKSLKTLPGSICALSSLKKL 144

Query: 372 CIHHCSRLKALPIELGNIEHLKVFTAFGLSFSKLPDSIGRLSNL 503
            +  C +L+ LP +LG+++ L V  A G + S +P++IG L  L
Sbjct: 145 NVSGCLKLEGLPEDLGSLKSLVVLLADGTAISTIPETIGNLEKL 188


>ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/166 (42%), Positives = 100/166 (60%)
 Frame = +3

Query: 6    EDLRWLSWEHCPLHCLPSGFSPQKLVILDLPFSKLRTMLELNMVYKKLKTLNMSFSSSLT 185
            E+LR L W   PL  LP+ F+ + LV L +P+S+++ + +   V + LK +N+  S  LT
Sbjct: 616  EELRHLYWYEYPLKSLPNDFNLKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKHSKFLT 675

Query: 186  NTPDFTKLPCLETLNLRGCVSLKEVHISIGSLVRLVFLDLGECCNLRSLPESICSLRALE 365
             TPDF+++  LE L L+GC+SL +VH S+G L +L FL L  C  L+SLP  IC L+ LE
Sbjct: 676  ETPDFSRVTNLERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLKCLE 735

Query: 366  YLCIHHCSRLKALPIELGNIEHLKVFTAFGLSFSKLPDSIGRLSNL 503
               +  CS+ + LP   GN+E LK F A G +   LP S   L NL
Sbjct: 736  VFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNL 781


>ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|222842587|gb|EEE80134.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/167 (42%), Positives = 103/167 (61%)
 Frame = +3

Query: 12  LRWLSWEHCPLHCLPSGFSPQKLVILDLPFSKLRTMLELNMVYKKLKTLNMSFSSSLTNT 191
           LRWL W   PL  +P   + + L++LD+ +S L+   E     KKLK L +S S  L  T
Sbjct: 50  LRWLCWSEFPLKAIPDDLTLEHLIVLDMRYSSLQQFSEELKSLKKLKFLYLSHSHKLIET 109

Query: 192 PDFTKLPCLETLNLRGCVSLKEVHISIGSLVRLVFLDLGECCNLRSLPESICSLRALEYL 371
           P+F   P LE L L+ C+SL +VH SIG L  L FL+L +C +L++LP SIC+L +L+ L
Sbjct: 110 PNFEGFPSLEKLKLKDCISLVKVHDSIGLLSHLQFLNLQDCVDLKNLPGSICALSSLKKL 169

Query: 372 CIHHCSRLKALPIELGNIEHLKVFTAFGLSFSKLPDSIGRLSNLVEL 512
            +  CS+L+ LP  LG+++ L +  A   + S LP++IG L NL +L
Sbjct: 170 NVSGCSKLEELPEHLGSLQSLVLLLADETAISTLPETIGDLKNLEKL 216


>emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/166 (42%), Positives = 99/166 (59%)
 Frame = +3

Query: 6   EDLRWLSWEHCPLHCLPSGFSPQKLVILDLPFSKLRTMLELNMVYKKLKTLNMSFSSSLT 185
           E+LR L W   PL  LP+ F+ + LV L +P+S+++ + +   V   LK +N+  S  LT
Sbjct: 498 EELRHLYWYEYPLKSLPNDFNLKNLVDLSMPYSQIKQLWKGTKVLXNLKFMNLKHSKFLT 557

Query: 186 NTPDFTKLPCLETLNLRGCVSLKEVHISIGSLVRLVFLDLGECCNLRSLPESICSLRALE 365
            TPDF+++  LE L L+GC+SL +VH S+G L +L FL L  C  L+SLP  IC L+ LE
Sbjct: 558 ETPDFSRVTNLERLVLKGCISLYKVHPSLGDLXKLNFLSLKNCKMLKSLPSCICDLKCLE 617

Query: 366 YLCIHHCSRLKALPIELGNIEHLKVFTAFGLSFSKLPDSIGRLSNL 503
              +  CS+ + LP   GN+E LK F A G +   LP S   L NL
Sbjct: 618 XFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNL 663


>ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|222862158|gb|EEE99664.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  133 bits (335), Expect = 1e-29
 Identities = 74/169 (43%), Positives = 103/169 (60%)
 Frame = +3

Query: 6   EDLRWLSWEHCPLHCLPSGFSPQKLVILDLPFSKLRTMLELNMVYKKLKTLNMSFSSSLT 185
           ++L WL W  CPL  LPS F    LVILD+  S +R + +   +  KLK LN+S+S  L 
Sbjct: 23  KELIWLCWFGCPLKSLPSDFHLNDLVILDMQESNVRKLWKGTKILNKLKILNLSYSKYLD 82

Query: 186 NTPDFTKLPCLETLNLRGCVSLKEVHISIGSLVRLVFLDLGECCNLRSLPESICSLRALE 365
            TP+F +L CLE L L GC SL +VH SIG+L  LV L+L  C +L++LPES+ +L++L+
Sbjct: 83  ETPNFRELSCLERLILTGCTSLVKVHQSIGNLKSLVLLNLHYCDSLKTLPESMGNLKSLQ 142

Query: 366 YLCIHHCSRLKALPIELGNIEHLKVFTAFGLSFSKLPDSIGRLSNLVEL 512
            L +  C +L+ LP  LG+IE L      G +  +LP S   L  L +L
Sbjct: 143 TLNVTQCRQLEKLPESLGDIESLTELFTKGTAIKQLPTSARYLKKLTKL 191


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