BLASTX nr result

ID: Cnidium21_contig00029927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029927
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513107.1| transcription factor, putative [Ricinus comm...   138   5e-31
ref|XP_002303907.1| GRAS family transcription factor [Populus tr...   137   9e-31
ref|XP_002299218.1| GRAS family transcription factor [Populus tr...   134   6e-30
ref|XP_002336914.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
emb|CBI17738.3| unnamed protein product [Vitis vinifera]              131   6e-29

>ref|XP_002513107.1| transcription factor, putative [Ricinus communis]
           gi|223548118|gb|EEF49610.1| transcription factor,
           putative [Ricinus communis]
          Length = 474

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/82 (75%), Positives = 72/82 (87%)
 Frame = +3

Query: 3   ISCEGTERKERHEKLEKWIPRLEMAGFGRVALSYHTMMQARTLLQSYGYEGFKIKEENGL 182
           I+CEG ERKERHEKLEKWI RLE+AGFGRV LSYH M+QA  LLQSYGY+G+KIKEENG 
Sbjct: 393 IACEGIERKERHEKLEKWILRLELAGFGRVPLSYHGMLQASRLLQSYGYDGYKIKEENGC 452

Query: 183 LFMCWKSQPLYSVSAWRFRRYN 248
             +CW+ +PL+SVSAWRFRRY+
Sbjct: 453 SVICWQDRPLFSVSAWRFRRYD 474


>ref|XP_002303907.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841339|gb|EEE78886.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  137 bits (345), Expect = 9e-31
 Identities = 60/82 (73%), Positives = 72/82 (87%)
 Frame = +3

Query: 3   ISCEGTERKERHEKLEKWIPRLEMAGFGRVALSYHTMMQARTLLQSYGYEGFKIKEENGL 182
           I+CEGTERKERHEKLEKWI RLE+AGFG + LSYH  +QA  LLQSYGY+G+KIKEENG 
Sbjct: 395 IACEGTERKERHEKLEKWILRLELAGFGSIPLSYHGRLQANRLLQSYGYDGYKIKEENGC 454

Query: 183 LFMCWKSQPLYSVSAWRFRRYN 248
           L +CW+ +PL+SVSAWRF+RY+
Sbjct: 455 LLICWQDRPLFSVSAWRFKRYD 476


>ref|XP_002299218.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846476|gb|EEE84023.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  134 bits (338), Expect = 6e-30
 Identities = 59/82 (71%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   ISCEGTERKERHEKLEKWIPRLEMAGFGRVALSYHTMMQARTLLQSYGYEGFKIKEENGL 182
           I+CEGT+RKERHEKLEKWI RLE+AGFG + LSYH  +QA   LQSYGY+G+KIKEENG 
Sbjct: 395 IACEGTDRKERHEKLEKWILRLELAGFGIIPLSYHGRLQANRFLQSYGYDGYKIKEENGC 454

Query: 183 LFMCWKSQPLYSVSAWRFRRYN 248
           L +CW+ +PL+SVSAWRFRRY+
Sbjct: 455 LVICWQDRPLFSVSAWRFRRYD 476


>ref|XP_002336914.1| predicted protein [Populus trichocarpa] gi|222837119|gb|EEE75498.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = +3

Query: 3   ISCEGTERKERHEKLEKWIPRLEMAGFGRVALSYHTMMQARTLLQSYGYEGFKIKEENGL 182
           I+CEGTERKERHEKLEKWI RLE+AGFG + LSYH  +QA  LLQSYGY+G+KIKEENG 
Sbjct: 273 IACEGTERKERHEKLEKWILRLELAGFGSIPLSYHGRLQANRLLQSYGYDGYKIKEENGC 332

Query: 183 LFMCWKSQPLYSVSAWRFRR 242
           L +CW+ +PL+SVSAWRF+R
Sbjct: 333 LLICWQDRPLFSVSAWRFKR 352


>emb|CBI17738.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  131 bits (329), Expect = 6e-29
 Identities = 57/82 (69%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   ISCEGTERKERHEKLEKWIPRLEMAGFGRVALSYHTMMQARTLLQSYGYEGFKIKEENGL 182
           I+CEG ERKERHEKLEKW+ RLE+AGFGRV LSY  M+QA  LL SYGY+G+++KEENG 
Sbjct: 354 IACEGPERKERHEKLEKWVMRLELAGFGRVPLSYQGMLQASRLLVSYGYDGYRMKEENGC 413

Query: 183 LFMCWKSQPLYSVSAWRFRRYN 248
           L +CW+ +PL+SVSAWRF+RY+
Sbjct: 414 LVICWQDRPLFSVSAWRFKRYD 435


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