BLASTX nr result

ID: Cnidium21_contig00029925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029925
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61860.1| hypothetical protein [Citrus unshiu]                   59   3e-07
ref|XP_002309472.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>dbj|BAK61860.1| hypothetical protein [Citrus unshiu]
          Length = 123

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = -2

Query: 172 MASVSMAMPLTTASPKTLQSPTSGPFLNPLPMKLSKRTEFVNS-HSKTRLQVQASLKE 2
           MASVSMAMPL++A+   L  P+S  FL PLP++ SK   F+    S+ RLQVQASLKE
Sbjct: 1   MASVSMAMPLSSATQNRLIQPSSESFLKPLPVRPSKAARFLGKPKSRARLQVQASLKE 58


>ref|XP_002309472.1| predicted protein [Populus trichocarpa] gi|222855448|gb|EEE92995.1|
           predicted protein [Populus trichocarpa]
          Length = 124

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = -2

Query: 172 MASVSMAMPLTTASPKTL-QSPTSGPFLNPLPMKLSKRTEF-VNSHSKTRLQVQASLKE 2
           MASVSMAMPL +AS K L Q P S  FL PLP++ S        S S+ RL+VQASLKE
Sbjct: 1   MASVSMAMPLASASQKRLEQPPNSQSFLKPLPIRPSMEVGLSTKSKSRARLEVQASLKE 59


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