BLASTX nr result

ID: Cnidium21_contig00029904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029904
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253...   109   2e-22
gb|ABK95458.1| unknown [Populus trichocarpa]                          103   2e-20
ref|XP_002308239.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002515298.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
emb|CBI36936.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253802 [Vitis vinifera]
          Length = 163

 Score =  109 bits (273), Expect = 2e-22
 Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 13/164 (7%)
 Frame = +1

Query: 76  MGNLASCFGIIGMNTSLKTAKLVDFHGNLRHINVPVTVAELMLEHPGFFISPEEDLRRTL 255
           MGN  +C      +++ KTAKL D HGNLR + VPVT AELMLE PG+ +S  +DLRRT 
Sbjct: 1   MGNYMTCHSF--QSSTPKTAKLFDAHGNLRRVKVPVTAAELMLEEPGYVVSRVDDLRRTR 58

Query: 256 RFPAMKADEELELGKLYMLVPTTRLHSKASVSEIAVLDSARLNRRWKRPSAKVLP----- 420
           R PAM+AD+ L  GK Y+++P +R+H   S  E+A++ +A   R  KR  ++VLP     
Sbjct: 59  RIPAMRADDVLLEGKAYLMMPVSRVHCVVSEVEMALIAAASKKRSKKRGGSRVLPAGNEG 118

Query: 421 --------TVIXXXXXXXXXSSVGLNDCRSENKWRPSLEPIDEG 528
                   + +            G +   +  +W P LE I EG
Sbjct: 119 TTENLEVQSRVLGSDGGGDVGFFGRHRLGNFRQWSPVLETISEG 162


>gb|ABK95458.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  103 bits (256), Expect = 2e-20
 Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 15/165 (9%)
 Frame = +1

Query: 76  MGNLASCFGIIGMNTSLKTAKLVDFHGNLRHINVPVTVAELMLEHPGFFISPEEDLRRTL 255
           MGN  SC  ++ +++  KTAKL++  GNLR +++PV  AELMLE PG  I+P ++L++  
Sbjct: 1   MGNYTSCCAVVTLSSKPKTAKLINSQGNLRQVSLPVKAAELMLEEPGHVIAPVDELKQRS 60

Query: 256 RFPAMKADEELELGKLYMLVPTTRLHSKASVSEIAVLDS--ARLNRR--WKRPSAKVLPT 423
           R  AM+AD+EL  GK+Y+ VP ++ + K S SE+A+++S  A   +R   KR  AKVLP 
Sbjct: 61  RTIAMRADDELLPGKVYLSVPLSKANCKISASELAIIESTIAACAKRSSKKRSGAKVLPA 120

Query: 424 V-IXXXXXXXXXSSVGL---NDCRSEN-------KWRPSLEPIDE 525
           + +         S V +   ND  S +       +W  +LEPI E
Sbjct: 121 MAVDLWEEKGSESGVKVLEGNDTSSTSYRLVNYRQWTLALEPIPE 165


>ref|XP_002308239.1| predicted protein [Populus trichocarpa] gi|222854215|gb|EEE91762.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  102 bits (254), Expect = 4e-20
 Identities = 65/165 (39%), Positives = 97/165 (58%), Gaps = 15/165 (9%)
 Frame = +1

Query: 76  MGNLASCFGIIGMNTSLKTAKLVDFHGNLRHINVPVTVAELMLEHPGFFISPEEDLRRTL 255
           MGN  SC  ++ ++   KTAKL++  GNLR +++PV  AELMLE PG  I+P ++L++  
Sbjct: 1   MGNYTSCCAVVTLSRKPKTAKLINSQGNLRQVSLPVKAAELMLEEPGHVIAPVDELKQRS 60

Query: 256 RFPAMKADEELELGKLYMLVPTTRLHSKASVSEIAVLDS--ARLNRR--WKRPSAKVLPT 423
           R  AM+AD+EL  GK+Y+ VP ++ + K S SE+A+++S  A   +R   KR  AKVLP 
Sbjct: 61  RTIAMRADDELLPGKVYLSVPLSKANCKISASELAIIESTIAACAKRSSKKRSGAKVLPA 120

Query: 424 V-IXXXXXXXXXSSVGL---NDCRSEN-------KWRPSLEPIDE 525
           + +         S V +   ND  S +       +W  +LEPI E
Sbjct: 121 MAVDLWEEKGSESGVKVLEGNDTSSTSYRLVNYRQWTLALEPIPE 165


>ref|XP_002515298.1| conserved hypothetical protein [Ricinus communis]
           gi|223545778|gb|EEF47282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
 Frame = +1

Query: 76  MGNLASCFGIIGMNTSLKTAKLVDFHGNLRHINVPVTVAELMLEHPGFFISPEEDLRRTL 255
           MGN +SCF I   N  LKTAKL+D  G LR + +PV  AELMLE PG+ +S   +L RT 
Sbjct: 1   MGNYSSCFCIHRSN--LKTAKLIDSKGTLRQLKLPVKAAELMLEEPGYVVSAAHELLRTG 58

Query: 256 RFPAMKADEELELGKLYMLVPTTRLHSKASVSEIAVLDSARLNRRW---KRPSAKVLPTV 426
           R  A++A++E+   K+Y+ +P  R++ K S SE+ ++  A    +    K+  AKVLP V
Sbjct: 59  RVIALRAEDEVLARKVYLSLPLCRVNRKISESEMRIIQCAVAVEKMSPKKKSGAKVLPAV 118

Query: 427 ---IXXXXXXXXXSSVGL--------NDCRSEN--KWRPSLEPIDE 525
              +           VG+        + CR  N  +W P LEPI E
Sbjct: 119 AVEVKEEEEEIESEVVGVLEEQDTDFSGCRLANYQRWTPVLEPIFE 164


>emb|CBI36936.3| unnamed protein product [Vitis vinifera]
          Length = 121

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/93 (50%), Positives = 64/93 (68%)
 Frame = +1

Query: 76  MGNLASCFGIIGMNTSLKTAKLVDFHGNLRHINVPVTVAELMLEHPGFFISPEEDLRRTL 255
           MGN  +C      +++ KTAKL D HGNLR + VPVT AELMLE PG+ +S  +DLRRT 
Sbjct: 1   MGNYMTCHSF--QSSTPKTAKLFDAHGNLRRVKVPVTAAELMLEEPGYVVSRVDDLRRTR 58

Query: 256 RFPAMKADEELELGKLYMLVPTTRLHSKASVSE 354
           R PAM+AD+ L  GK Y+++P +R+ S+   S+
Sbjct: 59  RIPAMRADDVLLEGKAYLMMPVSRVQSRVLGSD 91


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