BLASTX nr result

ID: Cnidium21_contig00029901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029901
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16818.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245...   124   1e-26
ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis...   124   1e-26
ref|XP_003537556.1| PREDICTED: uncharacterized protein LOC100802...   110   1e-22
ref|XP_002892728.1| EMB1745 [Arabidopsis lyrata subsp. lyrata] g...   107   1e-21

>emb|CBI16818.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  124 bits (311), Expect = 1e-26
 Identities = 80/176 (45%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
 Frame = -1

Query: 506 LYQMGRTVILELKCPKHVEGI-AIDPQPDWSLDSLLFEINSIENKLNLS------ISSRE 348
           L  MG  V LEL+CP++  GI A DP+PDWS ++L+ E+NS+E KLN S       +  E
Sbjct: 37  LLAMG-AVKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSIFPIPFTKTE 95

Query: 347 ILPGKGFKRNP-AFVMHVSDDEMESEECSADSGDVDSQALVVGTRFACXXXXXXXXXXXX 171
                  K+ P AFVM VSDDEME  E       V  ++LV G+RFAC            
Sbjct: 96  SRGLSNVKKGPTAFVMRVSDDEMEDVEREGGVEGVYDRSLVAGSRFACDELYLSDSDDES 155

Query: 170 ELVLNGEPYLMEKVGLVEGALSELTHEHRLVVMEEVRNQISTLEADLADKNEKFTS 3
            L  + + +LM+K G+ EGA  ELTHEH+L V EEVR QIS LE DL  + +K TS
Sbjct: 156 NL--HDQFHLMDKAGVAEGAFFELTHEHQLAVKEEVRTQISVLETDLTHERKKSTS 209


>ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245667 [Vitis vinifera]
          Length = 680

 Score =  124 bits (310), Expect = 1e-26
 Identities = 77/169 (45%), Positives = 99/169 (58%), Gaps = 8/169 (4%)
 Frame = -1

Query: 485 VILELKCPKHVEGI-AIDPQPDWSLDSLLFEINSIENKLNLS------ISSREILPGKGF 327
           V LEL+CP++  GI A DP+PDWS ++L+ E+NS+E KLN S       +  E       
Sbjct: 26  VKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSIFPIPFTKTESRGLSNV 85

Query: 326 KRNP-AFVMHVSDDEMESEECSADSGDVDSQALVVGTRFACXXXXXXXXXXXXELVLNGE 150
           K+ P AFVM VSDDEME  E       V  ++LV G+RFAC             L  + +
Sbjct: 86  KKGPTAFVMRVSDDEMEDVEREGGVEGVYDRSLVAGSRFACDELYLSDSDDESNL--HDQ 143

Query: 149 PYLMEKVGLVEGALSELTHEHRLVVMEEVRNQISTLEADLADKNEKFTS 3
            +LM+K G+ EGA  ELTHEH+L V EEVR QIS LE DL  + +K TS
Sbjct: 144 FHLMDKAGVAEGAFFELTHEHQLAVKEEVRTQISVLETDLTHERKKSTS 192


>ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis]
           gi|223546107|gb|EEF47610.1| Nucleoporin GLE1, putative
           [Ricinus communis]
          Length = 613

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/160 (46%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 LELKCPKHVEGIAIDPQPDWSLDSLLFEINSIENKLNLSISSREILPGKGFKRNPAFVMH 300
           LEL+CP+ V  + +DP PDWS DSLL E++S+ENKLN S SS         +   AFVM 
Sbjct: 8   LELRCPQRVNEVGVDPNPDWSFDSLLSELSSLENKLNNS-SSAPFTKTLSRRSRRAFVMR 66

Query: 299 VSDDEMESEECSADSGDVDSQALVVGTRFACXXXXXXXXXXXXELV-LNGEPYLMEKVGL 123
           VSDDE+E  +   D     +Q+LVV  RF                  L+   YLMEKVGL
Sbjct: 67  VSDDEVEDNDSEGDDEKDHTQSLVVAKRFNYDDIHLCDSDDSDYENDLDSYSYLMEKVGL 126

Query: 122 VEGALSELTHEHRLVVMEEVRNQISTLEADLADKNEKFTS 3
           VE +L EL+ EH+L V EE+RNQIS LE +L  ++EK  S
Sbjct: 127 VESSLFELSQEHQLGVKEEIRNQISALEMELMRESEKSNS 166


>ref|XP_003537556.1| PREDICTED: uncharacterized protein LOC100802744 [Glycine max]
          Length = 629

 Score =  110 bits (276), Expect = 1e-22
 Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
 Frame = -1

Query: 497 MGRTVILELKCP-KHVEGIAIDPQPDWSLDSLLFEINSIENKL--NLSISSREILP---- 339
           M   V L L+C  + V+G+A +P+PDW+ D L+ E+N++E KL  N S S++   P    
Sbjct: 1   MRGAVKLNLRCSSQRVDGVAAEPEPDWTFDDLVSELNALETKLATNASSSTQRSSPLDKS 60

Query: 338 ----GKGFKRNPAFVMHVSDDEMESEECSADSGDVDSQALVV---GTRFACXXXXXXXXX 180
               GK  +R  AFV+    DE + E+  +D  D   +ALVV   G RF C         
Sbjct: 61  ISKCGKEIQRGRAFVLRA--DEFDMEDSESDDDDHVDRALVVTDSGKRFTCDELYLSDDD 118

Query: 179 XXXELVLNGEPYLMEKVGLVEGALSELTHEHRLVVMEEVRNQISTLEADLADKNEKFTS 3
                     PYLM+++G VEGAL ELTHEH+L V +E+RN+IS LE  L ++ +  TS
Sbjct: 119 SDIASGFEVRPYLMDELGEVEGALLELTHEHQLRVKDEIRNKISALETALVNETQNSTS 177


>ref|XP_002892728.1| EMB1745 [Arabidopsis lyrata subsp. lyrata]
           gi|297338570|gb|EFH68987.1| EMB1745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 614

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/167 (37%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
 Frame = -1

Query: 491 RTVILELKCPKHVEGIAIDPQPDWSLDSLLFEINSIENKLN------LSISSREILPGKG 330
           R ++LE  CPK V+GI+IDP+P+W+ DSL+ EI S+E KLN        I++  +  G+ 
Sbjct: 7   RGIVLEPPCPKSVDGISIDPEPNWNFDSLVAEIESVEKKLNGFSMFPQPITNTTLRIGRS 66

Query: 329 FKRNPAFVMHVSDDEMESEECSADSGDVD-SQALVVGTRFACXXXXXXXXXXXXELVLNG 153
                 FVM VSD+EMES++   +  + D SQ    G RFAC                + 
Sbjct: 67  ---GGGFVMRVSDEEMESDDVEEEEEEEDHSQICTAGKRFACDELYLSDESDDE---FDH 120

Query: 152 EP-YLMEKVGLVEGALSELTHEHRLVVMEEVRNQISTLEADLADKNE 15
           EP Y+M K+GL E AL E+ ++H+  + +++RNQ+S +E ++ ++ E
Sbjct: 121 EPEYMMNKMGLAESALYEVINDHQTEIKDDIRNQVSVVETEIMNEIE 167


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