BLASTX nr result

ID: Cnidium21_contig00029900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029900
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263...   189   2e-46
emb|CBI16537.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II tra...   178   4e-43
ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II tra...   177   8e-43
ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781...   176   2e-42

>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
          Length = 1932

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +1

Query: 1   VGPWDPSQGIHNPDERLKLWLFLPGRHSAVVEKAQSAVSRLRVLASGVWLAPGDSEEVSV 180
           VGPWDPSQG+HNPDE++KLWLFLPGRHS+V E AQ AVSRLRV+ASG WLAPGDSEEV+ 
Sbjct: 67  VGPWDPSQGLHNPDEKIKLWLFLPGRHSSVAEAAQVAVSRLRVVASGFWLAPGDSEEVAA 126

Query: 181 ALSQALRNCIERALAGLSYVRFGDVFSRYHPFSQSEELFRRGQ 309
           ALSQALRNCIERAL GL+Y+RFGDVFS+YHPFSQSEELFRRGQ
Sbjct: 127 ALSQALRNCIERALIGLNYMRFGDVFSKYHPFSQSEELFRRGQ 169


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +1

Query: 1   VGPWDPSQGIHNPDERLKLWLFLPGRHSAVVEKAQSAVSRLRVLASGVWLAPGDSEEVSV 180
           VGPWDPSQG+HNPDE++KLWLFLPGRHS+V E AQ AVSRLRV+ASG WLAPGDSEEV+ 
Sbjct: 67  VGPWDPSQGLHNPDEKIKLWLFLPGRHSSVAEAAQVAVSRLRVVASGFWLAPGDSEEVAA 126

Query: 181 ALSQALRNCIERALAGLSYVRFGDVFSRYHPFSQSEELFRRGQ 309
           ALSQALRNCIERAL GL+Y+RFGDVFS+YHPFSQSEELFRRGQ
Sbjct: 127 ALSQALRNCIERALIGLNYMRFGDVFSKYHPFSQSEELFRRGQ 169


>ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Cucumis sativus]
          Length = 1926

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/103 (80%), Positives = 97/103 (94%)
 Frame = +1

Query: 1   VGPWDPSQGIHNPDERLKLWLFLPGRHSAVVEKAQSAVSRLRVLASGVWLAPGDSEEVSV 180
           VGPWDPSQG+HNPDE++KLWLFLPGRHS+VVE AQ+AVS+LRV+ASG+W++PGDSEEV+ 
Sbjct: 67  VGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQAAVSKLRVVASGLWISPGDSEEVAA 126

Query: 181 ALSQALRNCIERALAGLSYVRFGDVFSRYHPFSQSEELFRRGQ 309
           ALSQALRNCIERAL GLSY+RFGDVF++YH   QSEELFRRGQ
Sbjct: 127 ALSQALRNCIERALTGLSYMRFGDVFTKYH-HMQSEELFRRGQ 168


>ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Cucumis sativus]
          Length = 1925

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/103 (79%), Positives = 97/103 (94%)
 Frame = +1

Query: 1   VGPWDPSQGIHNPDERLKLWLFLPGRHSAVVEKAQSAVSRLRVLASGVWLAPGDSEEVSV 180
           VGPWDPSQG+HNPDE++KLWLFLPGRHS+VVE AQ+AVS+LRV+ASG+W++PGDSEEV+ 
Sbjct: 67  VGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQAAVSKLRVVASGLWISPGDSEEVAA 126

Query: 181 ALSQALRNCIERALAGLSYVRFGDVFSRYHPFSQSEELFRRGQ 309
           ALSQALRNCIER+L GLSY+RFGDVF++YH   QSEELFRRGQ
Sbjct: 127 ALSQALRNCIERSLTGLSYMRFGDVFTKYH-HMQSEELFRRGQ 168


>ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781873 [Glycine max]
          Length = 1918

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/103 (80%), Positives = 95/103 (92%)
 Frame = +1

Query: 1   VGPWDPSQGIHNPDERLKLWLFLPGRHSAVVEKAQSAVSRLRVLASGVWLAPGDSEEVSV 180
           VGPWDPSQG+HNPDE++KLWLFLPGRHS+VVE AQ+AVS LRV+ASG+WLAPGDSEEV+ 
Sbjct: 67  VGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQTAVSGLRVVASGLWLAPGDSEEVAA 126

Query: 181 ALSQALRNCIERALAGLSYVRFGDVFSRYHPFSQSEELFRRGQ 309
           ALSQALRNC+ERAL GL Y+RFGDVFS++H F Q EELFRRGQ
Sbjct: 127 ALSQALRNCVERALFGLYYMRFGDVFSKFHQF-QREELFRRGQ 168


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