BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029899
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38197.1| unknown [Medicago truncatula]                           55   3e-11
gb|ACJ85344.1| unknown [Medicago truncatula]                           55   3e-11
ref|NP_001184978.1| proteasome subunit beta type-5-A [Arabidopsi...    50   2e-10
ref|XP_002315619.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-10
ref|NP_172765.1| proteasome subunit beta type-5-A [Arabidopsis t...    50   2e-10

>gb|AFK38197.1| unknown [Medicago truncatula]
          Length = 271

 Score = 55.5 bits (132), Expect(2) = 3e-11
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +1

Query: 178 LQCRLYELENERRISLTRASTLLRRIVFSYHHCLGSLVDIMIAGWDE 318
           ++CRL+EL N+RRIS+T AS LL  I++SY   +GS V  MIAGWDE
Sbjct: 115 IKCRLHELANKRRISVTGASKLLANILYSYRG-MGSSVGTMIAGWDE 160



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = +3

Query: 321 GLGLYNMHHDVGMLKGDRFAVGSGSRDANVVLD*GY 428
           G GLY +  + G LKG+RF+VGSGS  A  VLD GY
Sbjct: 162 GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197


>gb|ACJ85344.1| unknown [Medicago truncatula]
          Length = 262

 Score = 55.5 bits (132), Expect(2) = 3e-11
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +1

Query: 178 LQCRLYELENERRISLTRASTLLRRIVFSYHHCLGSLVDIMIAGWDE 318
           ++CRL+EL N+RRIS+T AS LL  I++SY   +GS V  MIAGWDE
Sbjct: 115 IKCRLHELANKRRISVTGASKLLANILYSYRG-MGSSVGTMIAGWDE 160



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = +3

Query: 321 GLGLYNMHHDVGMLKGDRFAVGSGSRDANVVLD*GY 428
           G GLY +  + G LKG+RF+VGSGS  A  VLD GY
Sbjct: 162 GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197


>ref|NP_001184978.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
           gi|332190845|gb|AEE28966.1| proteasome subunit beta
           type-5-A [Arabidopsis thaliana]
          Length = 298

 Score = 50.4 bits (119), Expect(2) = 2e-10
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +1

Query: 178 LQCRLYELENERRISLTRASTLLRRIVFSYHHCLGSLVDIMIAGWDE 318
           ++CRL+EL N+RRIS++ AS LL  +++SY   +G  V  MIAGWDE
Sbjct: 142 IKCRLHELANKRRISVSGASKLLANMLYSYRG-MGLSVGTMIAGWDE 187



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = +3

Query: 321 GLGLYNMHHDVGMLKGDRFAVGSGSRDANVVLD*GY 428
           G GLY + ++ G LKGDRF+VGSGS  A  VLD GY
Sbjct: 189 GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 224


>ref|XP_002315619.1| predicted protein [Populus trichocarpa] gi|222864659|gb|EEF01790.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 54.3 bits (129), Expect(2) = 2e-10
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +1

Query: 178 LQCRLYELENERRISLTRASTLLRRIVFSYHHCLGSLVDIMIAGWDE 318
           ++CRL+EL N+RRIS+T AS LL  I+FSY   +G  V  MIAGWDE
Sbjct: 119 IKCRLHELANKRRISVTGASKLLANILFSYRG-MGLSVGTMIAGWDE 164



 Score = 38.1 bits (87), Expect(2) = 2e-10
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = +3

Query: 321 GLGLYNMHHDVGMLKGDRFAVGSGSRDANVVLD*GY 428
           G GLY +  + G LKG RF+VGSGS  A  +LD GY
Sbjct: 166 GPGLYYVDSEGGRLKGTRFSVGSGSPYAYGILDSGY 201


>ref|NP_172765.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
           gi|3914425|sp|O23717.1|PSB5A_ARATH RecName:
           Full=Proteasome subunit beta type-5-A; AltName: Full=20S
           proteasome beta subunit E-1; AltName: Full=Proteasome
           component E; AltName: Full=Proteasome epsilon-1 chain;
           Flags: Precursor gi|4850389|gb|AAD31059.1|AC007357_8
           Identical to gb|Y13695 multicatalytic endopeptidase
           complex, proteasome precursor, beta subunit (prce) from
           Arabidopsis thaliana. ESTs gb|Y09360, gb|F13852,
           gb|T20555, gb|T44620, gb|AI099779 and gb|AA586183 come
           from this gene [Arabidopsis thaliana]
           gi|13194776|gb|AAK15550.1|AF348579_1 putative proteasome
           epsilon chain precursor [Arabidopsis thaliana]
           gi|2511596|emb|CAA74029.1| multicatalytic endopeptidase
           complex, proteasome precursor, beta subunit [Arabidopsis
           thaliana] gi|3421117|gb|AAC32072.1| 20S proteasome beta
           subunit PBE1 [Arabidopsis thaliana]
           gi|23297641|gb|AAN12998.1| proteasome epsilon chain
           precursor [Arabidopsis thaliana]
           gi|332190844|gb|AEE28965.1| proteasome subunit beta
           type-5-A [Arabidopsis thaliana]
          Length = 274

 Score = 50.4 bits (119), Expect(2) = 2e-10
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = +1

Query: 178 LQCRLYELENERRISLTRASTLLRRIVFSYHHCLGSLVDIMIAGWDE 318
           ++CRL+EL N+RRIS++ AS LL  +++SY   +G  V  MIAGWDE
Sbjct: 118 IKCRLHELANKRRISVSGASKLLANMLYSYRG-MGLSVGTMIAGWDE 163



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = +3

Query: 321 GLGLYNMHHDVGMLKGDRFAVGSGSRDANVVLD*GY 428
           G GLY + ++ G LKGDRF+VGSGS  A  VLD GY
Sbjct: 165 GPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGY 200