BLASTX nr result

ID: Cnidium21_contig00029871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029871
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568150.1| aarF domain-containing protein kinase [Arabidop...    71   8e-11
ref|XP_002873199.1| ABC1 family protein [Arabidopsis lyrata subs...    67   1e-09
ref|XP_002275465.1| PREDICTED: uncharacterized aarF domain-conta...    64   2e-08
ref|XP_002329238.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|NP_568150.1| aarF domain-containing protein kinase [Arabidopsis thaliana]
           gi|75261770|sp|Q9ASX5.1|Y5520_ARATH RecName:
           Full=Uncharacterized aarF domain-containing protein
           kinase At5g05200, chloroplastic; Flags: Precursor
           gi|13605575|gb|AAK32781.1|AF361613_1 AT5g05200/K2A11_7
           [Arabidopsis thaliana] gi|14334952|gb|AAK59653.1|
           unknown protein [Arabidopsis thaliana]
           gi|16648993|gb|AAL24348.1| Unknown protein [Arabidopsis
           thaliana] gi|17104611|gb|AAL34194.1| unknown protein
           [Arabidopsis thaliana] gi|20259938|gb|AAM13316.1|
           unknown protein [Arabidopsis thaliana]
           gi|22137078|gb|AAM91384.1| At5g05200/K2A11_7
           [Arabidopsis thaliana] gi|332003457|gb|AED90840.1| aarF
           domain-containing protein kinase [Arabidopsis thaliana]
          Length = 540

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/70 (57%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = +3

Query: 84  VVISAFRGVSHIRFPIFHHPQFS-STTACGRSRKL--KRGSKGFTLFARYSQTQDLFTSR 254
           + +SAFRG    R P+FHH QF  + T  G S+K+   R  KGF L A+YSQTQDLFTSR
Sbjct: 1   MAVSAFRGT---RLPLFHHSQFPVARTVSGTSKKMIGARNFKGFVLTAQYSQTQDLFTSR 57

Query: 255 LQDSIENLPK 284
           LQ  IE LPK
Sbjct: 58  LQSQIEKLPK 67


>ref|XP_002873199.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319036|gb|EFH49458.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 540

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
 Frame = +3

Query: 84  VVISAFRGVSHIRFPIFHHPQFSSTTACGRSRKLKRGS---KGFTLFARYSQTQDLFTSR 254
           + +SAFRG    R P+F+H QF       R+ K   GS   KGF + A+YSQTQDLFTSR
Sbjct: 1   MAVSAFRGT---RLPLFYHSQFPVARTVSRTSKKMIGSRNLKGFVISAQYSQTQDLFTSR 57

Query: 255 LQDSIENLPK 284
           LQ  IE LPK
Sbjct: 58  LQSQIEKLPK 67


>ref|XP_002275465.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           At5g05200, chloroplastic [Vitis vinifera]
           gi|297736469|emb|CBI25340.3| unnamed protein product
           [Vitis vinifera]
          Length = 539

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/54 (62%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +3

Query: 126 PIFHHPQFSSTTA-CGRSRKLKRGSKGFTLFARYSQTQDLFTSRLQDSIENLPK 284
           P+ HH QF   T  C  SRKL    K   LFARYSQ QD F+SRLQDSIENLPK
Sbjct: 14  PLLHHSQFPVVTGLCVGSRKLNFPPKRLRLFARYSQAQDRFSSRLQDSIENLPK 67


>ref|XP_002329238.1| predicted protein [Populus trichocarpa] gi|222871019|gb|EEF08150.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
 Frame = +3

Query: 78  MAVV-ISAFRGVSHIRFPIFHH-----PQFSSTTACGRSRKLKRGSKGFTLFARYSQT-Q 236
           MA++ +SA RG    RFP+F +     PQF   +   RS KL   SKGFT FARY+Q+ Q
Sbjct: 1   MAIISVSALRGA---RFPLFTNNPHPFPQFPIPSR--RSSKLNFRSKGFTPFARYAQSQQ 55

Query: 237 DLFTSRLQDSIENLPK 284
           DLF+SRLQD IENLPK
Sbjct: 56  DLFSSRLQDGIENLPK 71


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