BLASTX nr result

ID: Cnidium21_contig00029870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029870
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea b...    92   3e-17
gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase ...    92   3e-17
emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanth...    92   4e-17
gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate syntha...    90   2e-16
ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...    86   3e-15

>dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +2

Query: 44  MAIPGTAIRLHHSIPQGLPSSRLNNHVAPKKFCLNAVATNPNGEERKMIRKESDGWKIDY 223
           MA+  ++   + S    L + R +N    K+FCL A A +P+ E + MIRKE DGWKID+
Sbjct: 1   MAVSSSSFVSNQSFSPFLKAPR-SNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDF 59

Query: 224 SGEKPPTPLLDTINYPIHMKNLS 292
           SGEKPPTPLLDTINYP+H KNLS
Sbjct: 60  SGEKPPTPLLDTINYPVHTKNLS 82


>gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +2

Query: 44  MAIPGTAIRLHHSIPQGLPSSRLNNHVAPKKFCLNAVATNPNGEERKMIRKESDGWKIDY 223
           MA+  ++   + S    L + R +N    K+FCL A A +P+ E + MIRKE DGWKID+
Sbjct: 1   MAVSSSSFVSNQSFSPFLKAPR-SNLCGRKQFCLRASAGHPDEEGKMMIRKEKDGWKIDF 59

Query: 224 SGEKPPTPLLDTINYPIHMKNLS 292
           SGEKPPTPLLDTINYP+H KNLS
Sbjct: 60  SGEKPPTPLLDTINYPVHTKNLS 82


>emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
 Frame = +2

Query: 44  MAIPGTAIRLHHSIPQGLPSSRLNNHVAPKKFCLNAVATNPNG--EERKMI--RKESDGW 211
           MA+ G  I L+  I     +    N+ A K+FCL A + N +   EE KMI  +KE DGW
Sbjct: 1   MAVSGAVIGLNPPISPAYWTVPRLNYTARKQFCLRASSVNSSNDAEEGKMISIKKEKDGW 60

Query: 212 KIDYSGEKPPTPLLDTINYPIHMKNLS 292
           KID+SGEKPPTPLLDTINYP+HMKNLS
Sbjct: 61  KIDFSGEKPPTPLLDTINYPVHMKNLS 87


>gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 713

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = +2

Query: 44  MAIPGTAIRLHHSIPQGLPSSRLNNHVAPKKFCLNAVATNPNGEERK-MIRKESDGWKID 220
           MA+ G+ I L+ S      S +L +    + F   +V+ +  G+E K MIRKE+DGWKID
Sbjct: 1   MAVQGSVIGLNQSFAPCFLSPKLKHFPQKQFFARASVSKSDGGDEGKLMIRKENDGWKID 60

Query: 221 YSGEKPPTPLLDTINYPIHMKNLS 292
           +SGEKPPTPLLDTIN+P+HMKNLS
Sbjct: 61  FSGEKPPTPLLDTINFPVHMKNLS 84


>ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = +2

Query: 128 PKKFCLNAVATNPNGEERKMIRKESDGWKIDYSGEKPPTPLLDTINYPIHMKNLS 292
           PK+FCL A + +PNGE + +  KE DG KIDYSGEKP TPLLDT+N+PIHMKNLS
Sbjct: 28  PKQFCLRASSNSPNGEGKNLPDKEKDGLKIDYSGEKPATPLLDTVNFPIHMKNLS 82


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