BLASTX nr result

ID: Cnidium21_contig00029868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029868
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|2...    64   6e-21
ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244...    64   2e-20
ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-19
ref|XP_004139043.1| PREDICTED: THUMP domain-containing protein 1...    60   2e-18
ref|XP_004154640.1| PREDICTED: THUMP domain-containing protein 1...    60   2e-18

>ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|222845557|gb|EEE83104.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 63.9 bits (154), Expect(2) = 6e-21
 Identities = 35/74 (47%), Positives = 45/74 (60%)
 Frame = -3

Query: 222 QASHEAINVIDTFYEELVSGRKSGVKYAELQDKPVNKKVTFTYXXXXXXXXXXXXXXXXX 43
           QAS EAINVID+FYEELV G+ + VK AEL +KP+NKK+ F+Y                 
Sbjct: 57  QASREAINVIDSFYEELVFGKDTSVKLAELPNKPINKKIKFSY---SDVEGDDDEEKEED 113

Query: 42  DKDDLDTNKESAQD 1
           ++D LD NK  A +
Sbjct: 114 EEDGLDENKSGAPE 127



 Score = 61.6 bits (148), Expect(2) = 6e-21
 Identities = 29/34 (85%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
 Frame = -2

Query: 415 RYLPQNKGVKK-GGYPLKPGVQGFFITCDGGRER 317
           RYLP NK VKK G YPL PGVQGFFITCDGGRER
Sbjct: 23  RYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRER 56


>ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244787 [Vitis vinifera]
           gi|297734958|emb|CBI17192.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score = 63.9 bits (154), Expect(2) = 2e-20
 Identities = 30/34 (88%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -2

Query: 415 RYLPQNKGVKK-GGYPLKPGVQGFFITCDGGRER 317
           RYLP NK VKK GGYPL PGVQGFFITCDGGRER
Sbjct: 22  RYLPHNKPVKKKGGYPLHPGVQGFFITCDGGRER 55



 Score = 60.1 bits (144), Expect(2) = 2e-20
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = -3

Query: 222 QASHEAINVIDTFYEELVSGRKSGVKYAELQDKPVNKKVTFTY 94
           QAS EA+NVID+F+EELV G+ SGVK + L +KP+NKK+ F+Y
Sbjct: 56  QASREALNVIDSFFEELVHGKDSGVKLSMLPNKPMNKKIKFSY 98


>ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|222849769|gb|EEE87316.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 59.7 bits (143), Expect(2) = 4e-19
 Identities = 28/33 (84%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
 Frame = -2

Query: 412 YLPQNKGV-KKGGYPLKPGVQGFFITCDGGRER 317
           YLP NK V KKG YPL PGVQGFFITCDGGRER
Sbjct: 24  YLPHNKPVRKKGSYPLHPGVQGFFITCDGGRER 56



 Score = 59.7 bits (143), Expect(2) = 4e-19
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = -3

Query: 222 QASHEAINVIDTFYEELVSGRKSGVKYAELQDKPVNKKVTFTY 94
           QAS EAINVID+FYEEL  G+ + VK A+  DKP NKK+ F+Y
Sbjct: 57  QASREAINVIDSFYEELAYGKDTSVKLADFPDKPTNKKIKFSY 99


>ref|XP_004139043.1| PREDICTED: THUMP domain-containing protein 1-like [Cucumis sativus]
          Length = 386

 Score = 60.5 bits (145), Expect(2) = 2e-18
 Identities = 28/34 (82%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -2

Query: 415 RYLPQNKGVKKGG-YPLKPGVQGFFITCDGGRER 317
           R+LP NK VKK G YPL+PGVQGFFITCDGGRER
Sbjct: 17  RFLPHNKPVKKKGHYPLRPGVQGFFITCDGGRER 50



 Score = 56.6 bits (135), Expect(2) = 2e-18
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -3

Query: 222 QASHEAINVIDTFYEELVSGRKSGVKYAELQDKPVNKKVTFT 97
           QAS EAINVID+F++EL  G+  GVK  EL DKP+NKK+ F+
Sbjct: 51  QASIEAINVIDSFFDELALGKNCGVKLTELADKPLNKKIKFS 92


>ref|XP_004154640.1| PREDICTED: THUMP domain-containing protein 1-like [Cucumis sativus]
          Length = 384

 Score = 60.5 bits (145), Expect(2) = 2e-18
 Identities = 28/34 (82%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = -2

Query: 415 RYLPQNKGVKKGG-YPLKPGVQGFFITCDGGRER 317
           R+LP NK VKK G YPL+PGVQGFFITCDGGRER
Sbjct: 17  RFLPHNKPVKKKGHYPLRPGVQGFFITCDGGRER 50



 Score = 56.6 bits (135), Expect(2) = 2e-18
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = -3

Query: 222 QASHEAINVIDTFYEELVSGRKSGVKYAELQDKPVNKKVTFT 97
           QAS EAINVID+F++EL  G+  GVK  EL DKP+NKK+ F+
Sbjct: 51  QASIEAINVIDSFFDELALGKNCGVKLTELADKPLNKKIKFS 92


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